Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., C4-dicarboxylate transport sensor protein DctB from Xanthobacter sp. DMC5

 Score =  315 bits (806), Expect = 5e-90
 Identities = 204/553 (36%), Positives = 319/553 (57%), Gaps = 26/553 (4%)

Query: 53  LDKYAHIPHLISKDKELVDALLSAQNSAQIDITNRYLEQVNEVIQAADTYLIDRFGNTIA 112
           +DK   +P ++++D E+  AL  A + A++D  ++ L+ + E  +    YLID  G+T+A
Sbjct: 70  IDKQRSLPVVLAQDPEVRGAL-EAPDPARLDALDQRLDALAEQARTGVIYLIDAEGHTVA 128

Query: 113 SSNWNLDRSFIGRNFAWRPYFYLSIAGQKSQYFALGSTSGQRGYYYAYPVIYAAEILGVI 172
           +SN+    SF+G ++ +RPYF +++A  ++++FA G+ S + G Y A  V     +LGV+
Sbjct: 129 ASNFRTPESFLGSDYGFRPYFRIALADGRAEHFAFGTVSRKPGLYLAQRVEAQGRVLGVL 188

Query: 173 VVKMDLSAIEQGWQSKSSYFVATDDHQVVFMSSQPAWLFHSVADLSPAQLNDIRQSQQYL 232
           V+K +   +E  W+  +     TD+  +V ++S+PA+ F +   L P + + IR+S Q+ 
Sbjct: 189 VLKAEFDGLEAEWRRFAEPTFVTDERHIVLIASEPAFRFRTTVPLDPVERDAIRESLQFG 248

Query: 233 DSPIPSLGWQGDLQAEQSE-----WRKPEKHWLQDDYIVSSRPLPELALTIRVLSPKIEL 287
           DSP+  L    DL     E      R P +   Q D++    P+P  + T+ VL+P    
Sbjct: 249 DSPLTRL----DLGPSPEEGGVLRLRLPGRSTAQ-DFVAVDMPVPSTSWTLTVLAPTAAT 303

Query: 288 FWSAFGLVIILCMLFAIVYLGFQ-LWHHRQLRQRQIEQLQQETKQKLEFEVMERTAKLHA 346
              A         L  +V LG   +W  R+ R+ +    + E ++ LE  V+ERTA+L A
Sbjct: 304 TRLATTAARASAALAGVVGLGSAGVWWTRRRRRVRALAREAEARRALEARVVERTAELSA 363

Query: 347 -------EIAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNG 399
                  E+ ER +   A    QDEL+QA+KLAVLGQ++A ++HE+N P+AAIR+FA+N 
Sbjct: 364 ANAQLVTEMEERRRARLAFDALQDELVQASKLAVLGQIAAGVAHEVNQPVAAIRTFAENS 423

Query: 400 RRFLATNKPERAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSAKEL 459
           R FL   +P  A  NL  I+ALTER+  I+ +L++FARKS +   + V L P+I  A  L
Sbjct: 424 RAFLDRGEPAAAAANLDTIAALTERIGAITGELRAFARKSAA-RIEPVALAPVIDGALLL 482

Query: 460 MTGQFKAQMTLLELC-DLETP-VWVRVNPIQLEQVLINLLTNALQALEGQAERVVQIRLQ 517
           M  +++   T + L  D++ P V V  + ++LEQVL+NL+ NA +A+  + +  ++IR++
Sbjct: 483 M--RYRLLQTDIALALDIDRPDVAVTGDRMRLEQVLVNLIQNAAEAIGTRRDGEIRIRVE 540

Query: 518 TSEQQIALFVDDNGPGVGIETLPHLFEPFHTTKKNGLGLGLSISQQILHSMQGTLSVATS 577
           T    + + V DNGPG+  E L  LF PF TTK  GLGLGL IS+ I+    GTL V   
Sbjct: 541 TRPDTVVVTVADNGPGLPEEMLGALFLPFTTTKPQGLGLGLVISKDIIAECGGTLKVEND 600

Query: 578 PLGGARFTITLPR 590
             GGA FT+TLPR
Sbjct: 601 --GGAVFTVTLPR 611