Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., Signal transduction histidine-protein kinase AtoS from Xanthobacter sp. DMC5

 Score =  110 bits (276), Expect = 1e-28
 Identities = 85/284 (29%), Positives = 143/284 (50%), Gaps = 44/284 (15%)

Query: 343 KLHAEIAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNGRRF 402
           +L A      K    L++TQ +L+ A K+A LG++ A ++HELNNP++ +   A   +R+
Sbjct: 186 ELRAAYGALAKAHEHLKRTQQQLVHAEKMASLGRLVAGVAHELNNPISFVYGNAHAMKRY 245

Query: 403 -------------------LATNKPE-RAEENLSRISALTERMAKISEQLKSFA---RKS 439
                              LA  + E R +  LS I A    M + +E+++      R+ 
Sbjct: 246 AERLIAYLDQVHAGADATALAKARGELRIDRALSDIPATLSGMLEGAERVRDIVADLRRF 305

Query: 440 TSNEQQDVQLYPLILSAKELMTGQFKAQMTLLELCDLETPVWVRV--------NPIQLEQ 491
           +S+ ++  +++ L    +  +    K+QM        + P+ V V        +P  + Q
Sbjct: 306 SSDRREAREVFDLAGVVRSAVDWVAKSQMP-------DLPITVAVPEGLEAVGHPGHIHQ 358

Query: 492 VLINLLTNALQALEGQAERVVQI---RLQTSE-QQIALFVDDNGPGVGIETLPHLFEPFH 547
           V++NL+ NA+ A+EG+A+R ++I   R +T +  Q+A+ V D GPG+    +  +F+PF 
Sbjct: 359 VMMNLVQNAVDAMEGRADRRLEITGARFETPDGLQVAVRVRDTGPGIPDALMDRIFDPFF 418

Query: 548 TTKK--NGLGLGLSISQQILHSMQGTLSVATSPLGGARFTITLP 589
           TTK    G GLGLSI  +I    +G L  A  P GGA  ++ LP
Sbjct: 419 TTKPVGKGTGLGLSICYRIAEEHEGRLEAANHPEGGAILSLVLP 462