Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 908 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  122 bits (305), Expect = 9e-32
 Identities = 85/261 (32%), Positives = 138/261 (52%), Gaps = 14/261 (5%)

Query: 339 ERTAKLHAEIAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADN 398
           E+ A +  +   R  TE  +R++Q +L Q+AK+A LG+M+  ++HE+N PL  +R    N
Sbjct: 650 EQGALVEVQAVGRDNTE--VRRSQQQLTQSAKMATLGEMATGLAHEINQPLNVMRMAIVN 707

Query: 399 GRRFLATNKPE--RAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSA 456
             + L+    +     E L RI    +R A++ + ++ F R+S   EQQ       +   
Sbjct: 708 VLKRLSNGDAQIDYLTEKLQRIDTQVQRAARVVDHMRVFGRRSEI-EQQPFDPSQAVEGT 766

Query: 457 KELMTGQFKAQMTLLELCDLETPVWVRVNPIQLEQVLINLLTNALQALEGQAERVVQIR- 515
             L+    + +   + +   +  V V+ +  QLEQVLINL+ NA  AL  + ++  + R 
Sbjct: 767 LSLLGDGLRGKGVDVRITPADFTVQVKGHVDQLEQVLINLMVNARDALLSKRQKDPEFRP 826

Query: 516 -----LQTSEQQIALFVDDNGPGVGIETLPHLFEPFHTTKKNGL--GLGLSISQQILHSM 568
                 +   + + ++V+DNG G+    L  +FEPF TTK  G+  GLGLS+S  I+ +M
Sbjct: 827 WIAVHCEHDSRHVRIWVEDNGDGIDPRLLERIFEPFFTTKPIGVGTGLGLSVSYGIVENM 886

Query: 569 QGTLSVATSPLGGARFTITLP 589
            G LSVA +   GARF + LP
Sbjct: 887 GGRLSVANAE-QGARFCVELP 906