Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 588 a.a., cytochrome C biogenesis protein CcmE from Pseudomonas simiae WCS417

 Score =  284 bits (727), Expect = 6e-81
 Identities = 191/571 (33%), Positives = 317/571 (55%), Gaps = 39/571 (6%)

Query: 32  QALLNEH---QSQLDRFSSHIVATLDKYAHIPHLISKDKELVDALLSAQNSAQIDITNRY 88
           QAL+++      QL  +++ +   +++Y  +P +++ D E+++AL    ++A  D+ NR 
Sbjct: 35  QALVDDAARANQQLALYANSLHTLIERYRALPAVLALDSEMINALKGPLDTATQDLLNRK 94

Query: 89  LEQVNEVIQAADTYLIDRFGNTIASSNWNLDRSFIGRNFAWRPYFYLSIAGQKSQYFALG 148
           LE++N   Q++   L+DR G  +A+SNWNL  S++G N+A+RPYF  +++    +++A+G
Sbjct: 95  LERINGAAQSSTLELMDRTGLAVAASNWNLPSSYVGHNYAFRPYFSQTLSQGTGRFYAVG 154

Query: 149 STSGQRGYYYAYPVIYAAE-ILGVIVVKMDLSAIEQGWQSKSSYFVATDDHQVVFMSSQP 207
            T+G  GY+ +  V+   E  LG +VVK++   +E+ W   +   + +D   +VF+++QP
Sbjct: 155 VTTGIPGYFLSSAVVDEHEQFLGAMVVKLEFPELEREWAQGNDLLLVSDARGIVFIANQP 214

Query: 208 AWLFHSVADLSPAQLNDIRQSQQYLDSPIPSLGWQGDLQA--EQSEWRKPEKHWLQDDYI 265
            W + ++  L+ + L +++ ++QY    + +L     LQ   E S   +        +YI
Sbjct: 215 GWRYRNLRPLTASDLAELKATRQYDKKHLQALE-TSTLQRFDENSHLMRVNGPDGSANYI 273

Query: 266 VSSRPLPELALTIRVLSPKIELFWSA--FGLVII---LCMLFAIVYLGFQLWHHRQLRQR 320
             S PL     T+ +L      F      GL      L ++F +++L  Q W   +LRQR
Sbjct: 274 WESLPLKAEGWTLHLLRKPQFAFEDQRNAGLAAAGSWLALVFLVLFL-TQRWRLARLRQR 332

Query: 321 QIEQLQQETKQKLEFEVMERTAKLHAEIAERIKTEHALRQTQDELIQAAKLAVLGQMSAS 380
             E+L+Q         V ERT               ALR  QD L+Q+AKLA LGQMSA+
Sbjct: 333 SREELEQ--------LVEERT--------------QALRTAQDGLVQSAKLAALGQMSAA 370

Query: 381 ISHELNNPLAAIRSFADNGRRFLATNKPERAEENLSRISALTERMAKISEQLKSFARKST 440
           ++HE+N PL A R      R  L   + + A + L+ +  +  RMA ++  LK+FARKS 
Sbjct: 371 LAHEINQPLTAQRMQLATLRLLLDHGRVDDAYQALTPLDDMLTRMAALTGHLKTFARKSP 430

Query: 441 SNEQQDVQLYPLILSAKELMTGQFKAQMTLLELCDLETPVWVRVNPIQLEQVLINLLTNA 500
           S  ++ + L  ++  +  L+  + + + ++  + DL  P WVR + I+LEQVLINLL NA
Sbjct: 431 SGLRERLDLATVVDQSLHLLDARLRDE-SIGVVLDLTRPAWVRGDAIRLEQVLINLLRNA 489

Query: 501 LQALEGQAERVVQIRLQTSEQQIALFVDDNGPGVGIETLPHLFEPFHTTKK--NGLGLGL 558
           L A+  +  + ++IRL   EQ   L V D+G G+  E L  +F+PF TTK   +GLGLGL
Sbjct: 490 LDAMVDKPRKRLEIRLHADEQLWQLTVSDSGGGIAEEHLNSVFDPFFTTKPVGDGLGLGL 549

Query: 559 SISQQILHSMQGTLSVATSPLGGARFTITLP 589
           ++S  I+H + G L +A++   GA FT+TLP
Sbjct: 550 AVSYAIVHELGGRL-IASNRGDGAVFTLTLP 579