Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  278 bits (711), Expect = 5e-79
 Identities = 187/610 (30%), Positives = 317/610 (51%), Gaps = 27/610 (4%)

Query: 2   PSIRRLSLMLWVMFIVLVSMSTHLYWRFQY---QALLNEHQSQLDRFSSHIVATLDKYAH 58
           P + R   +  ++  +++ +    +W  +Y   + L +  + QL+  +  + + L KY +
Sbjct: 19  PRLIRQLFLPPLIIALMIGLGYIGFWVSEYYGIRTLSDTGERQLELHARTVESELSKYTY 78

Query: 59  IPHLISKDKELVDALLSAQNSAQIDITNRYLEQVNEVIQAADTYLIDRFGNTIASSNWNL 118
           +P L+  +   V ALL+  N       N YLE +N   ++   Y++D  G  +A+SNW  
Sbjct: 79  LPSLLELESS-VSALLADPNQETRKTVNDYLEGLNRRSRSRAIYVMDTTGRVLATSNWRD 137

Query: 119 DRSFIGRNFAWRPYFYLSIAGQKSQYFALGSTSGQRGYYYAYPVIYAAEILGVIVVKMDL 178
             S+ G + ++R YF  ++ GQ  +++ +GST+G+ GYY A+ +    +I+GV VVK+ L
Sbjct: 138 ADSYQGEDLSFRAYFQNAVRGQPGRFYGIGSTNGEPGYYLAHGLEEHGKIIGVAVVKVRL 197

Query: 179 SAIEQGWQSKSSYFVATDDHQVVFMSSQPAWLFHSVADLSPAQLNDIRQSQQYLDSPIPS 238
            A+E+ WQ        +D++ ++ +SS PA    +V  LS      +  S QY  + +  
Sbjct: 198 EALEERWQRARLEAFVSDENGIIILSSDPARRLKAVRPLSDDVKERLAHSLQYYWATLNE 257

Query: 239 LG--WQGDLQAEQSEWRKPEKHWLQDD-----YIVSSRPLPELALTIRVLSPKIELFWSA 291
           L    +  L     +   P    + +D     Y+  +RPL +      +L+P  +L  +A
Sbjct: 258 LEPLARERLNEGTEKLTFPANSEVVNDEHEVSYLAQTRPLNDTPWNFTLLTPLNDLRRAA 317

Query: 292 FGLVIILCMLFAIVYLGFQLWHHRQ---LRQRQIEQLQQETKQKLEFEVMERTAKLHA-- 346
               I++ + F +V      W+ R+     +    +  QE   +LE  + ERTA L A  
Sbjct: 318 INQGILVAVAFGLVAFLLIAWNERRKVIATRLAAREALQEANSQLERRIAERTADLRASN 377

Query: 347 -----EIAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNGRR 401
                +I ER + E  LR+ QDEL+QA KLA +GQMS SI+HELN PLAA+R+ + N  R
Sbjct: 378 ERLKGQIRERRQAEETLRRAQDELVQAGKLAAIGQMSTSIAHELNQPLAALRTLSGNTVR 437

Query: 402 FLATNKPERAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSAKELMT 461
           FL     + A  NL  I+ L +RM +I+  L+SFAR+   ++Q +  L   + +A +++ 
Sbjct: 438 FLERGALDTASANLKTINELIDRMGRITASLRSFARR--GDDQGEASLAKAVDAAFQVLG 495

Query: 462 GQFKAQMTLLELCDLETPVWVRVNPIQLEQVLINLLTNALQALEGQAERVVQIRLQTSEQ 521
            +  +    L L    +   ++++  +LEQ+L+NL+ NAL A++ Q    + +   +++ 
Sbjct: 496 ARLDS--LPLTLHRDFSHAQLQIDQTRLEQILVNLIGNALDAMQAQPAPELWLEGSSADG 553

Query: 522 QIALFVDDNGPGVGIETLPHLFEPFHTTK--KNGLGLGLSISQQILHSMQGTLSVATSPL 579
           +  L V DNG G+  E   HLFEPF TTK  + GLGLGL++S  +  +  G L+V     
Sbjct: 554 KYRLHVRDNGHGIDPEARKHLFEPFFTTKPGEQGLGLGLTLSASLAAATGGNLAVEHPAS 613

Query: 580 GGARFTITLP 589
           GG  F + LP
Sbjct: 614 GGTAFVLCLP 623