Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., Two-component sensor PilS from Variovorax sp. SCN45

 Score =  133 bits (334), Expect = 2e-35
 Identities = 87/244 (35%), Positives = 133/244 (54%), Gaps = 9/244 (3%)

Query: 359 RQTQDELI---QAAKLAVLGQMSASISHELNNPLAAIRSFADNGRRFLATNKPE--RAEE 413
           R+  +EL+   Q A+L  LG++SA ++HELN PL A+ + A   RR L    P+   A E
Sbjct: 252 RRRAEELLRLGQVARLNALGELSAGLAHELNQPLTAVLANAQAARRLLDDEPPDLSTARE 311

Query: 414 NLSRISALTERMAKISEQLKS-FARKSTSNEQQDVQLYPLILSAKELMTGQFKAQMTLLE 472
            +          A +  +L+    R   + E + + L  ++ SA  L+  +F  +  + +
Sbjct: 312 AMGHAVEQARCAANVVGRLRRVIERPEAAGEAKPLVLQDVVRSAMHLLAPEFGRRAIVTQ 371

Query: 473 LCDL-ETPVWVRVNPIQLEQVLINLLTNALQALE--GQAERVVQIRLQTSEQQIALFVDD 529
                + PV V+   + LEQ++ NLL NALQALE     +R + I +  + ++  L V D
Sbjct: 372 FDPTAQAPVRVQAEAVALEQIVHNLLMNALQALELVPAGDRRLVIAVGRNGEEGVLTVTD 431

Query: 530 NGPGVGIETLPHLFEPFHTTKKNGLGLGLSISQQILHSMQGTLSVATSPLGGARFTITLP 589
           NG G+  E LP LFEPF +T++ GLGLGLS+S+ +   M G+LS A +   GARFT+ LP
Sbjct: 432 NGRGIAPEALPRLFEPFFSTREGGLGLGLSLSETLASGMGGSLSAANASPRGARFTLLLP 491

Query: 590 RFTP 593
              P
Sbjct: 492 LVAP 495