Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 724 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

 Score =  145 bits (367), Expect = 4e-39
 Identities = 97/323 (30%), Positives = 165/323 (51%), Gaps = 22/323 (6%)

Query: 48  HIVATLD---KYAHIPHLISKDKELVDALLSAQNSAQIDITNRYLEQVNEVIQAADTYLI 104
           H++   D   KY+++P       E++ AL   +++A     N Y+E+VN    +   YL 
Sbjct: 62  HVLGLRDSAGKYSYLPFTTGLHPEVLAALAHPEDAAVKQRANLYIEEVNRQAGSDALYLS 121

Query: 105 DRFGNTIASSNWNLDRSFIGRNFAWRPYFYLSIAGQKSQYFALGSTSGQRGYYYAYPV-I 163
           D  G T+A+SNW+  +SF+G ++A RPYF  + AG+   ++ LG T+G+ G + + PV  
Sbjct: 122 DLQGLTLAASNWDTPQSFVGESYANRPYFRDARAGRSGLFYGLGQTTGEPGLFISAPVRP 181

Query: 164 YAAEILGVIVVKMDLSAIEQGWQSKSSYFVATDDHQVVFMSSQPAWLFHSVADLSPAQLN 223
               +LGV+ VK+ L  +++ W       + TD   +VF+SS P+W++ +   LSP  + 
Sbjct: 182 DGGAVLGVVTVKVSLRQLQEAWTFVRDPILLTDARGIVFLSSVPSWMYQATRALSPTDVE 241

Query: 224 DIRQSQQY-LDSPIPSLGWQGDLQAEQ-------SEWRKPEKHWLQDDYIVSSRPLPELA 275
            IR+ QQY   +  P L WQ +    Q       S   KP +      ++    PLP+L 
Sbjct: 242 GIRRDQQYGARTDFPPLPWQLERDDGQPGYLVRTSIGGKPRR------FLAVDEPLPDLG 295

Query: 276 LTIRVLSPKIELFWSAFGLVIILCMLFAIVYLGFQLWHHRQLRQRQIEQLQQETKQKLEF 335
            T+ V++   E+  +     ++  ++  ++ LG   W   QLR+R+  + Q++ ++ LE 
Sbjct: 296 WTLTVMADHAEVSRARERTWMLGLLVAGVLLLGGLYW---QLRERRFAE-QRDARRDLEL 351

Query: 336 EVMERTAKLHAEIAERIKTEHAL 358
            V ERT  L    A R   E +L
Sbjct: 352 RVRERTHALDEAHAFRKAMEDSL 374



 Score =  135 bits (340), Expect = 6e-36
 Identities = 81/244 (33%), Positives = 135/244 (55%), Gaps = 3/244 (1%)

Query: 347 EIAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNGRRFLATN 406
           +I E+ + E   RQ  ++L  A +LA LG+M+++++HELN PL A+ +FA   + F    
Sbjct: 477 DITEQKRAELRQRQNDEQLQHAQRLASLGEMASTLAHELNQPLMALSNFASAAKAFAEQG 536

Query: 407 KPERAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSAKELMTGQFKA 466
                  +L    A  +R A+I  +++ F R+ T   + D  +  L+ +   L+ G+ + 
Sbjct: 537 NQALLVSSLDETMAQAQRSAEIVRRIRGFVRQRTVGTE-DCAVPALVTNVLALLQGEMRQ 595

Query: 467 QMTLLELCDLETPVWVRVNPIQLEQVLINLLTNALQALEG--QAERVVQIRLQTSEQQIA 524
           +    E+        VR + + LEQVL+NLL+N+LQA++   Q +RVV+I  +  + ++ 
Sbjct: 596 RQVRAEVRVPANLPPVRGDRVLLEQVLLNLLSNSLQAMQSTPQEKRVVEIDAEALDGRMR 655

Query: 525 LFVDDNGPGVGIETLPHLFEPFHTTKKNGLGLGLSISQQILHSMQGTLSVATSPLGGARF 584
           + + D G G+       +F PF TTK  GLGLGL+I + I+ + +G LS A  P GG  F
Sbjct: 656 IRIADRGAGIDASLAEQVFAPFFTTKAGGLGLGLNICRTIVEAHRGRLSFADRPGGGTVF 715

Query: 585 TITL 588
           T+ L
Sbjct: 716 TLAL 719