Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  132 bits (332), Expect = 5e-35
 Identities = 95/294 (32%), Positives = 153/294 (52%), Gaps = 19/294 (6%)

Query: 300 MLFAIVYLGFQLWHHRQLRQRQIEQLQQETKQKLEFEVMERTAKLHAEIAERIKTEHALR 359
           +LF+++ +    W  R  R   +  +    ++K E  +      L   + ER     AL+
Sbjct: 401 VLFSLIAVS---WKDR--RHYLVTLIDISKRKKAEIALQNANRDLQQRVEERTA---ALK 452

Query: 360 QTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNGRRFLATNKPERAEENLSRIS 419
             Q ELI+A+K+A LG+MS++I+HELN PL  +R+   +    L   + +  + N   + 
Sbjct: 453 SAQQELIEASKMAALGRMSSAITHELNQPLTGLRTLLSSNELLLERGETQLLKANTKLVH 512

Query: 420 ALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSAKELMTGQFKAQMTLLEL---CDL 476
           +L +RMA ++ QLKSFA     N    +Q   L  + +E++    +A++T +++      
Sbjct: 513 SLIDRMAAMTSQLKSFA----FNRPDALQAISLPDALQEILR-IHQARLTPVDVRVRLSS 567

Query: 477 ETPVWVRVNPIQLEQVLINLLTNALQALEGQAERVVQIRLQTSEQQIALFVDDNGPGVGI 536
           + P+ V     +L QVL NL++NAL A+    E  + I   + E Q+ + V DNG G+  
Sbjct: 568 DLPL-VMGEEQRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAP 626

Query: 537 ETLPHLFEPFHTTKK--NGLGLGLSISQQILHSMQGTLSVATSPLGGARFTITL 588
           E L  +FEPF T+KK   GLGLGL+I    L  MQG++    +P  G  F I L
Sbjct: 627 ELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRDMQGSIVATNNPDAGMSFEIRL 680



 Score = 50.8 bits (120), Expect = 2e-10
 Identities = 61/335 (18%), Positives = 139/335 (41%), Gaps = 43/335 (12%)

Query: 9   LMLWVMFIVLVSMSTHLY---WRFQYQALLNEHQSQLDRFSSHIVATLDKYAHIPHLISK 65
           ++L ++ ++ V   +H     W+ + QA  +  Q  LD + S +  TL ++ H+P+L++ 
Sbjct: 9   IVLVILLLIAVRWGSHAVSENWQLR-QAQRHGEQRLLD-YISDVRRTLSRFYHLPYLMTN 66

Query: 66  DKELVDALLSAQNSAQIDITNRYLEQVNEVIQAADTYLIDRFGNTIASS----NWNLDRS 121
           +   +  L    +  Q  +  + L Q+++       Y++   G+ + +S    NW L   
Sbjct: 67  EANTLK-LFQGDDRPQAQLQQQ-LAQLDKAANTKGWYILTLSGSLLTASKNAENWKLSDG 124

Query: 122 FIGRNFAWRPYFYLSIAGQKSQYFALGSTSGQRGYYYAYPVIYAAEILGVIVVKMDLSAI 181
                   +   +  +  ++       S      Y+ A PV    EI+G + V++DL+ +
Sbjct: 125 --------KAIIHKILQQREGISIVTKSVGSTPTYFVAAPVYLDVEIVGAVAVQVDLNVL 176

Query: 182 EQGWQSKSSYFVATDDHQVVFMSSQPAWLFHSVADLSPAQLNDIRQSQQYLDSPIPSLGW 241
              W +     +  +  +  F+SS   +    +A  +  ++    Q +   D    +L W
Sbjct: 177 ADQWFASDELILFQNSQRHYFLSSSSVYSADWIA--THPEVVAAAQKRSLFDGTRLTL-W 233

Query: 242 QGDLQAEQSEWRKPEKHWLQDDYIVSSRPLPELALTIRVLSP----KIELFWSAFGLVII 297
           Q +                Q  Y+  S  L +L  T+  L+P       + W +   ++ 
Sbjct: 234 QVE----------------QAPYLAQSVTLDDLNWTLTYLTPLKNLNATVNWISTSAMVG 277

Query: 298 LCMLFAIVYLGFQLWHHRQLRQRQIEQLQQETKQK 332
           + +L  ++ L ++ +  R L + +I+ +  E +++
Sbjct: 278 VLLLLLLMRLRYEQYQKR-LSEAKIQHVLFEAEER 311