Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1682 a.a., Sensor histidine kinase/GAF domain protein from Pseudomonas putida KT2440

 Score =  140 bits (353), Expect = 4e-37
 Identities = 103/304 (33%), Positives = 162/304 (53%), Gaps = 17/304 (5%)

Query: 295  VIILCMLFAIVYLGFQLWHHRQLRQR--QIEQLQQETKQKLEFEVMERTAKLHAEIAE-- 350
            ++I  +L  +VYL  +L  +    QR   +E L  +    L+      TAK +  +AE  
Sbjct: 1383 LVIQGVLIGLVYLENRLVPNLFGSQRLAMLEILASQAAVSLQ------TAKFYTRLAEEN 1436

Query: 351  --RIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNGRRFLATNKP 408
              R + E  LR+++ EL ++A L  + ++SASI+HE++ PL  I S A    R+L   KP
Sbjct: 1437 QIRTQMEAELRRSRAELARSAHLQAMNELSASIAHEISQPLLGIASNAAASLRWLKRAKP 1496

Query: 409  --ERAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSAKELMTGQFKA 466
              E A   L  I   +ER   I   L+S A++S   + + V+L  LI     L T    A
Sbjct: 1497 DLEEAIAGLEDIRNDSERAGNIVRALRSLAKQSPM-QLKAVKLDELIREVVRL-TSADAA 1554

Query: 467  QMTLLELCDLETPVWVRVNPIQLEQVLINLLTNALQALEG-QAERVVQIRLQTSEQQIAL 525
            +  +     L+  V V  +P+QL+Q++ NL+TNAL+AL G + + V++I     E ++ +
Sbjct: 1555 KGKVDVQTRLKAGVCVTADPVQLQQLVFNLITNALEALAGYRCDGVLKITSAVVEDEVEI 1614

Query: 526  FVDDNGPGVGIETLPHLFEPFHTTKKNGLGLGLSISQQILHSMQGTLSVATSPLGGARFT 585
             VDDNGPG+  +    +F+ FHTTK  G+G+GL+I   +  +  G L    S LGG R  
Sbjct: 1615 CVDDNGPGIAADERERVFDAFHTTKTGGMGMGLAICSSVAQAHGGQLQALVSQLGGCRIR 1674

Query: 586  ITLP 589
            ++LP
Sbjct: 1675 VSLP 1678