Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  119 bits (298), Expect = 3e-31
 Identities = 87/271 (32%), Positives = 137/271 (50%), Gaps = 32/271 (11%)

Query: 348 IAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLA----------------- 390
           + E  +   AL+  Q +LIQ  K+A LG++ A ++HELNNP++                 
Sbjct: 173 VGELRRAYEALKTAQAQLIQQEKMASLGRLIAGVAHELNNPISFVYGNVHALSKYSTRIA 232

Query: 391 ----AIRSFADNGRRFLATNKPERAEENLSRISALTERMAKISEQLKSFARK------ST 440
               AI +  D   R  A     R +  L+ + AL E  A+ ++++    R       S 
Sbjct: 233 AYLDAIHAGCDETERE-ALRASLRIDSTLADLPALMEGTAEGAQRVADIVRSLKRLSFSA 291

Query: 441 SNEQQDVQLYPLILSAKELMTGQFKAQMTLLELCDLETPVWVRVNPIQLEQVLINLLTNA 500
            ++ ++  L  ++  A +  +G  K  +  +EL DL   + VR NP QL QV++NL+ NA
Sbjct: 292 GSKPEEFDLGEVVAKAVQ-WSGSGKKGLASIEL-DLPDHLAVRGNPGQLHQVIVNLIENA 349

Query: 501 LQALEGQAERVVQIRLQTSEQQIALFVDDNGPGVGIETLPHLFEPFHTTKK--NGLGLGL 558
           L A+ G+ +  V++  +    Q  L + DNGPG+  + +  +F+PF TTK    G GLGL
Sbjct: 350 LDAVAGRPDGRVEVTGKAEGGQTVLTIADNGPGIPPDIVGKVFDPFFTTKPVGKGTGLGL 409

Query: 559 SISQQILHSMQGTLSVATSPLGGARFTITLP 589
            IS  I+    G+L    +  GGARFTI+LP
Sbjct: 410 WISYGIIRDHGGSLEAGATASGGARFTISLP 440