Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  269 bits (688), Expect = 2e-76
 Identities = 189/579 (32%), Positives = 305/579 (52%), Gaps = 33/579 (5%)

Query: 25  LYWRFQYQAL---LNEHQSQLDRFSSHIVATLDKYAHIPHLISKDKELVDALLSAQNSAQ 81
           +Y R + +AL   L   Q +L  ++S I A LD+++++P  ++ D+E+++ L    + +Q
Sbjct: 34  VYQRARIEALDGALVMGQQRLGLYASTIRAALDRFSYLPATMALDREVIEVL--GGHPSQ 91

Query: 82  IDITNRYLEQVNEVIQAADTYLIDRFGNTIASSNWNLDRSFIGRNFAWRPYFYLSIAGQK 141
               +  LE +N   ++A  Y++DR G T+A+SNW  + S++G ++++RPYF   +    
Sbjct: 92  AAALSAKLETINAGARSASLYVMDRRGVTVAASNWRTETSYVGNDYSFRPYFTQVMTTGT 151

Query: 142 SQYFALGSTSGQRGYYYAYPVIYAA-EILGVIVVKMDLSAIEQGWQSKSSYFVATDDHQV 200
            ++F +G T+   GY+ A  V  A+ EI+G +VVK+DL  +E+ W       + TD+  +
Sbjct: 152 GRFFGIGVTTKLPGYFLASAVRTASGEIIGSVVVKIDLETLEEDWGGGDGAVMVTDEDGM 211

Query: 201 VFMSSQPAWLFHSVADLSPAQLNDIRQSQQYLDSPIPSLGWQGDLQAEQSEWRKPEKHWL 260
           V ++S+P W +     ++      +  +Q+Y   P+  L  Q  LQ  ++   +      
Sbjct: 212 VILTSRPLWKYAVDGPVTTELRRKLDATQRYGAVPLRPLERQALLQLGETARLEQVG--- 268

Query: 261 QDDYIVSSRPLPELALTIRVLSPKIELFWSAFGLVIILCMLFAIVYLGFQLWHHRQLRQR 320
           +  ++  S+ L E    I  L+   E+  S       L  L  + ++   L+    LRQR
Sbjct: 269 ESAFVAQSQALDEEGWAIHYLADW-EVMESNVRSTAALAGLGWVAFILLLLY----LRQR 323

Query: 321 QIE-QLQQETKQKLEFEVMERTAKLHAEIAERIKTEHALRQTQDELIQAAKLAVLGQMSA 379
           ++  + + + K+ LE  V +RT  L AEI ER +TE  LR+TQDELI A K+A LGQMS 
Sbjct: 324 RLVLKAKLDAKETLERLVAQRTEALSAEIVERQRTERHLRETQDELIHAGKMAALGQMST 383

Query: 380 SISHELNNPLAAIRSFADNGRRFLATNKPERAEENLSRISALTERMAKISEQLKSFARKS 439
           +I+HELN PLAAI++F  + R F+     E A  NL+ I  L  RMA I   L+ FARKS
Sbjct: 384 AIAHELNQPLAAIQTFVASSRIFVERGDAETAGANLTMIDDLCRRMADIIRHLRVFARKS 443

Query: 440 TSNEQQDVQLYPLILSAKELMTGQFKAQMTLLELCDLETPVW-------VRVNPIQLEQV 492
               Q        ++     ++         L   D++  VW       V  +P +L+QV
Sbjct: 444 PVASQ--------VMDPAASVSRAVALLAVRLRQADVDL-VWAPPQGLMVAGDPGRLDQV 494

Query: 493 LINLLTNALQALEGQAERVVQIRLQTSEQQIALFVDDNGPGVGIETLPHLFEPFHTTKK- 551
            +NLL NA+ A+     R +Q+      + + + V D+GPG+  +    +FEPF TTK  
Sbjct: 495 FVNLLANAVDAVAQSPARRIQVDAMAVGEDVVITVADSGPGLTSDVADRVFEPFFTTKDV 554

Query: 552 -NGLGLGLSISQQILHSMQGTLSVATSPLGGARFTITLP 589
             GLGLGLS+S  I+  M G++ V     GGA F I+LP
Sbjct: 555 GEGLGLGLSLSYGIIRDMGGSIRVENRSGGGAVFLISLP 593