Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 655 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  118 bits (295), Expect = 9e-31
 Identities = 82/258 (31%), Positives = 139/258 (53%), Gaps = 23/258 (8%)

Query: 347 EIAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADN--GRRFLA 404
           +I ER + E   RQ Q++L   A+L  +G+M+++++HELN PL+AI S+A     R    
Sbjct: 402 DITERKRAEELSRQHQEKLQHTARLITMGEMASTLAHELNQPLSAIASYATGCLNRLSAG 461

Query: 405 TNKPERAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSAKELMTG-- 462
             +PE     L+++ A  +R  +I  ++  F RKS      +  + P +L   E++ G  
Sbjct: 462 DARPEELVPPLTKLGAQAQRAGQIIRRIHDFVRKS------EPLVVPCLLD--EIIEGVV 513

Query: 463 -----QFKAQMTLLELCDLETP----VWVRVNPIQLEQVLINLLTNALQAL--EGQAERV 511
                  + +   ++L    TP      V  + I +EQV++NL+ NA++A+    + +R 
Sbjct: 514 GFLEPDARKRGIRIDLDLSLTPGAARPRVEADHILIEQVILNLVRNAMEAMGHTPRPQRR 573

Query: 512 VQIRLQTSEQQIALFVDDNGPGVGIETLPHLFEPFHTTKKNGLGLGLSISQQILHSMQGT 571
           + I LQ ++ Q  + V D G G+  E   +LF PF TTK+ G+G+GL+I + I+ + +G 
Sbjct: 574 LTISLQCADGQARIRVADRGTGIPPEIAANLFSPFFTTKETGMGMGLNICRSIVEAHRGH 633

Query: 572 LSVATSPLGGARFTITLP 589
           L    +P GG+ F  TLP
Sbjct: 634 LWFEENPGGGSVFLFTLP 651