Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., two component sensor kinase for C4-dicarboxylate transport from Agrobacterium fabrum C58

 Score =  221 bits (563), Expect = 5e-62
 Identities = 160/467 (34%), Positives = 244/467 (52%), Gaps = 27/467 (5%)

Query: 142 SQYFALGSTSGQRGYYYAYPVIYA-AEILGVIVVKMDLSAIEQGWQSKSSYFVATDDHQV 200
           S+++ALG+ S + G Y +  +  +    LGV++ K++ + +E  W          D + V
Sbjct: 2   SEHYALGNVSRRPGLYISRRIDASDGRPLGVVIAKVEFNRLESDWNIGGKPVYVVDRNGV 61

Query: 201 VFMSSQPAWLFHSVADLSPAQLNDIRQSQQYLDSPIPSLGWQGDLQAEQSEWRKPEKHW- 259
           V M+S P W F +VA +  A+   I +S Q+ +  + +L ++    A  S    P  H  
Sbjct: 62  VLMTSVPEWRFKTVAPIDEARRKIIAESLQFGNETLATLPFR---VARSSGDGVPLIHVD 118

Query: 260 ----LQDDYIVSSRPLPELALTIRVLSPKIELFWSAF--GLVIILCMLFAIVYLG-FQLW 312
                + DY+    P+P  + T+  L P           G V+ L  L  ++ L  F LW
Sbjct: 119 GPARARGDYLQLEVPVPTTSWTLHYLQPVAPALNVKIREGRVVALATLMPLMALSAFWLW 178

Query: 313 H-HRQLRQRQIEQLQQETKQKLEFEVMERTAKL-------HAEIAERIKTEHALRQTQDE 364
             H+ LR+++ EQ     + +LE +V ERT  L        AEI    KT   LR  Q E
Sbjct: 179 RRHKALREKEEEQ---RARAELEMKVQERTRDLTKTRDHLQAEITLHEKTTGELRNVQHE 235

Query: 365 LIQAAKLAVLGQMSASISHELNNPLAAIRSFADNGRRFLATNKPERAEENLSRISALTER 424
           L+QA +L++LGQ++A ++HE+N P+A IR+FADN R  L  ++   A ENL  I+ALTER
Sbjct: 236 LVQANRLSILGQVAAGVAHEINQPVATIRAFADNARTLLKRDRLAEANENLEDIAALTER 295

Query: 425 MAKISEQLKSFARKS-TSNEQQDVQLYPLILSAKELMTGQFKAQMTLLELCDLETPVWVR 483
           +  I+  LK  ARK  T+ E    +L  +I  A  L+  +F  QM  L++   +  + V 
Sbjct: 296 IGTITTDLKILARKGRTAAEPVSARL--VIEGAVVLLRSRFSGQMDALDIVLPDQDLKVL 353

Query: 484 VNPIQLEQVLINLLTNALQALEGQAERVVQIRLQTSEQQIALFVDDNGPGVGIETLPHLF 543
            + I+LEQ+LINLL NAL+A E      V++R++     + + V DNG G+       LF
Sbjct: 354 GSRIRLEQILINLLQNALEATETIETARVEVRVREEGDMVVISVSDNGAGIPEAIRAQLF 413

Query: 544 EPFHTTKKNGLGLGLSISQQILHSMQGTLSVATSPLGGARFTITLPR 590
            PF+T+K++GLGLGL IS  I     G + V TS   G  F++ L R
Sbjct: 414 SPFNTSKESGLGLGLVISNDIASDYGGRIEV-TSSGAGTSFSVYLKR 459