Pairwise Alignments

Query, 208 a.a., ATP-dependent Clp endopeptidase, proteolytic subunit ClpP from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  322 bits (824), Expect = 5e-93
 Identities = 157/207 (75%), Positives = 186/207 (89%), Gaps = 2/207 (0%)

Query: 1   MSYQ-EKNAMSPIFDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVA 59
           MSY  E++ ++P   ALVPMV+EQTSRGERS+DIYSRLLKERVIFLTGQVEDHMANL+VA
Sbjct: 37  MSYSGERDNLAPHM-ALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVA 95

Query: 60  QLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAG 119
           Q+LFLE+ENP+KDI+LYINSPGG +TAGMSIYDTMQFIKP+VST+CMGQA SMGAFLL  
Sbjct: 96  QMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTA 155

Query: 120 GAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHTGQPIEVIE 179
           GA GKR+ LPNSRVMIHQPLGG+QGQA+DI+IHA+EIL +K ++N L+A HTGQ +E IE
Sbjct: 156 GAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIE 215

Query: 180 RDTDRDNFMSADQAVEYGLVDAVLKHR 206
           RDT+RD F+SA +AVEYGLVD++L HR
Sbjct: 216 RDTERDRFLSAPEAVEYGLVDSILTHR 242