Pairwise Alignments

Query, 208 a.a., ATP-dependent Clp endopeptidase, proteolytic subunit ClpP from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., ATP-dependent Clp protease proteolytic subunit (NCBI) from Escherichia coli BW25113

 Score =  320 bits (819), Expect = 2e-92
 Identities = 157/207 (75%), Positives = 185/207 (89%), Gaps = 2/207 (0%)

Query: 1   MSYQ-EKNAMSPIFDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVA 59
           MSY  E++  +P   ALVPMV+EQTSRGERS+DIYSRLLKERVIFLTGQVEDHMANL+VA
Sbjct: 1   MSYSGERDNFAPHM-ALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVA 59

Query: 60  QLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAG 119
           Q+LFLE+ENP+KDI+LYINSPGG +TAGMSIYDTMQFIKP+VST+CMGQA SMGAFLL  
Sbjct: 60  QMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTA 119

Query: 120 GAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHTGQPIEVIE 179
           GA GKR+ LPNSRVMIHQPLGG+QGQA+DI+IHA+EIL +K ++N L+A HTGQ +E IE
Sbjct: 120 GAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIE 179

Query: 180 RDTDRDNFMSADQAVEYGLVDAVLKHR 206
           RDT+RD F+SA +AVEYGLVD++L HR
Sbjct: 180 RDTERDRFLSAPEAVEYGLVDSILTHR 206