Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Xanthobacter sp. DMC5

 Score =  573 bits (1476), Expect = e-168
 Identities = 300/423 (70%), Positives = 344/423 (81%), Gaps = 5/423 (1%)

Query: 5   SKEGGSSK--LLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKKES 62
           SK GGS     LYCSFCGKSQHEVRKLIAGP+V+ICDECV+LC DIIREE K  L K   
Sbjct: 2   SKTGGSDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREESKSSLVKSRD 61

Query: 63  AALPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGP 122
             +PTP++IR+ LDDYVIGQ+HAKKVL+VAV+NHYKRL N  T    VEL KSNILLIGP
Sbjct: 62  G-IPTPKEIRKVLDDYVIGQDHAKKVLSVAVHNHYKRL-NHATKHGDVELAKSNILLIGP 119

Query: 123 TGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGI 182
           TGSGKTLLA+TLAR+LDVPFTMADATTLTEAGYVGEDVENII KLLQ  DY+V +A+RGI
Sbjct: 120 TGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGI 179

Query: 183 VYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDT 242
           VYIDEIDKISRKS+NPSITRDVSGEGVQQALLK++EGTVASVPPQGGRKHPQQEFLQVDT
Sbjct: 180 VYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDT 239

Query: 243 SKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLVKYGL 302
           + ILFICGGAFAGLDK+I  R    T IGF A V   ++ +   E+F +VEPEDL+KYGL
Sbjct: 240 TNILFICGGAFAGLDKIISSRSKGSTSIGFQAKVAPPEDRRP-GEVFREVEPEDLLKYGL 298

Query: 303 IPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAA 362
           IPEFIGRLPV ATL +LDE AL +IL EPKNAL KQY  LFE+E+VDL   E+AL AIA 
Sbjct: 299 IPEFIGRLPVLATLGDLDEEALKKILSEPKNALVKQYQRLFEMESVDLTIHEEALGAIAR 358

Query: 363 KAMKRKTGARGLRSILEAVLLETMYELPSMEEVSKVVIDESVINGESAPLLIYSANESQA 422
           KA++RKTGARGLRSI+E +LL+TM++LP +E V +VVI   V+   + PL IY+     A
Sbjct: 359 KAIERKTGARGLRSIMEGILLDTMFDLPGLEGVEEVVISREVVEQNARPLYIYADRVGDA 418

Query: 423 AGA 425
             +
Sbjct: 419 GAS 421