Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., HslU--HslV peptidase ATPase subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 94.4 bits (233), Expect = 6e-24
 Identities = 81/229 (35%), Positives = 108/229 (47%), Gaps = 61/229 (26%)

Query: 165 QKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASV 224
           ++L ++  Y+V     GIV+IDEIDKI ++ E      DVS EGVQ+ LL LIEG+  S 
Sbjct: 237 EELKEQAIYNVEN--NGIVFIDEIDKICKRGEVSG--PDVSREGVQRDLLPLIEGSTVST 292

Query: 225 PPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKT 284
                 KH       V T  ILFI  GAF         +VA                   
Sbjct: 293 ------KHGM-----VRTDHILFIASGAF---------QVA------------------- 313

Query: 285 LSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFE 344
                   +P DL     IPE  GRLP+   L  L      +IL EPK +LT+QY AL +
Sbjct: 314 --------KPSDL-----IPELQGRLPIRVELEALSSNDFKRILTEPKASLTEQYVALMK 360

Query: 345 LENVDLEFREDALKAIAAKAMK-----RKTGARGLRSILEAVLLETMYE 388
            E VD++F ED +K IA  A +        GAR L ++LE ++ E  ++
Sbjct: 361 TEQVDVQFTEDGIKQIADAAWQVNETTENIGARRLHTVLERLMDEISFD 409



 Score = 93.2 bits (230), Expect = 1e-23
 Identities = 47/101 (46%), Positives = 72/101 (71%), Gaps = 2/101 (1%)

Query: 67  TPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSG 126
           TPR+I   L+ ++IGQ+ AK+ +A+A+ N ++R++  ++    VE+   NIL+IGPTG G
Sbjct: 5   TPREIVSELNRHIIGQDKAKRAVAIALRNRWRRMQLEESLR--VEVTPKNILMIGPTGVG 62

Query: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
           KT +A  LA+L +VPF   +AT  TE GYVG++VE+II+ L
Sbjct: 63  KTEIARRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDL 103