Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., ATP-dependent hsl protease ATP-binding subunit HslU from Sphingobium sp. HT1-2

 Score = 88.6 bits (218), Expect = 3e-22
 Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 2/104 (1%)

Query: 67  TPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSG 126
           TP+ I   LD ++IGQ  AK+ +AVA+ N ++R        +  E+   NIL+IGPTG G
Sbjct: 6   TPKAIVAALDAHIIGQHDAKRAVAVALRNRWRRQHLPADLRD--EVTPKNILMIGPTGCG 63

Query: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQK 170
           KT ++  LA+L D PF   +AT  TE GYVG DVE I++ L+++
Sbjct: 64  KTEISRRLAKLADAPFVKVEATKFTEVGYVGRDVEQIVRDLVEE 107



 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 68/233 (29%), Positives = 101/233 (43%), Gaps = 61/233 (26%)

Query: 179 ERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFL 238
           + GIV++DEIDKI+           VS EGVQ+ LL LIEGT  S            ++ 
Sbjct: 240 QNGIVFLDEIDKIAVSDVRGG---SVSREGVQRDLLPLIEGTTVST-----------KYG 285

Query: 239 QVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLV 298
            + T  ILFI  GAF          VA                           +P DL 
Sbjct: 286 PLKTDHILFIASGAF---------HVA---------------------------KPSDL- 308

Query: 299 KYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALK 358
               +PE  GRLP+   L  L E   + IL + K +L  QY AL   E V ++   + ++
Sbjct: 309 ----LPELQGRLPIRVELKALTEEDFVAILSDTKASLVAQYRALLATEEVTIDLTPEGIR 364

Query: 359 AIAAKAMK-----RKTGARGLRSILEAVLLETMYELPSMEEVSKVVIDESVIN 406
           A+A  A +        GAR L++++E +L +  +E         +VID++ ++
Sbjct: 365 AVAKIAAEVNSEVENIGARRLQTVMEKLLEDVSFEAED-RRGETLVIDQAYVD 416