Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., ATP-dependent protease ATP-binding subunit HslU from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 99.0 bits (245), Expect = 3e-25
 Identities = 87/322 (27%), Positives = 145/322 (45%), Gaps = 66/322 (20%)

Query: 98  KRLRNGDTTSEGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVG 157
           +++RNG+     +E+  S   + G    G  +   ++  + ++   M    T      +G
Sbjct: 177 EKIRNGELEDRKIEIRVSQSAMPGMGVMGPGMDEASMMNIQEMISGMMPKKTKKRKVTIG 236

Query: 158 EDVENIIQKLLQKC-DYDVAKAER-------GIVYIDEIDKISRKSENPSITRDVSGEGV 209
           E  + ++++   K  D D  K E        G+++IDEIDK++  S       DVS EGV
Sbjct: 237 EARKILLEEEASKLIDMDEVKEEAIFKAENSGVIFIDEIDKVASASNKGGGGPDVSREGV 296

Query: 210 QQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTG 269
           Q+ LL ++EG+  +            ++  + T  ILFI  GAF          VA    
Sbjct: 297 QRDLLPIVEGSTVNT-----------KYGIITTDHILFIAAGAF---------HVA---- 332

Query: 270 IGFGADVRSKDNSKTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILC 329
                                  +P DL     IPE  GR P+   L  L +    QIL 
Sbjct: 333 -----------------------KPSDL-----IPELQGRFPIRVELDSLTKDDFYQILK 364

Query: 330 EPKNALTKQYAALFELENVDLEFREDALKAIAAKAMKRKT-----GARGLRSILEAVLLE 384
            PKNALTKQY AL   E+V+L F ++AL  IA+ A +  T     GAR L +++  +L +
Sbjct: 365 FPKNALTKQYEALLSSEDVELTFNDEALDEIASIAYEVNTEVENIGARRLHTVMSRLLND 424

Query: 385 TMYELP-SMEEVSKVVIDESVI 405
            ++++P  +   + +++D +++
Sbjct: 425 ILFDVPDKIGANAHILVDRAMV 446



 Score = 91.3 bits (225), Expect = 6e-23
 Identities = 46/110 (41%), Positives = 76/110 (69%), Gaps = 2/110 (1%)

Query: 61  ESAALPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLI 120
           ++ A  TP +I   LD Y+IGQ+ AK+ +A+A+ N ++R+ N D + +  ++  +NIL+I
Sbjct: 3   DNIASLTPAQIVAELDKYIIGQKDAKRNVAIALRNRWRRM-NADKSIQS-DIVPNNILMI 60

Query: 121 GPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQK 170
           G TG GKT +A  LA++ D PFT  +A+  TE GYVG DVE++++ L+++
Sbjct: 61  GATGVGKTEIARRLAKIADAPFTKVEASKFTEVGYVGRDVESMVRDLVEQ 110