Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., ATP-dependent protease ATPase subunit HslU from Magnetospirillum magneticum AMB-1

 Score = 95.1 bits (235), Expect = 4e-24
 Identities = 49/108 (45%), Positives = 71/108 (65%), Gaps = 2/108 (1%)

Query: 62  SAALPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIG 121
           SAA  +PR+I   LD +++GQ  AK+ +A+A+ N ++R +  ++  E  E+   NIL+IG
Sbjct: 2   SAAAFSPREIVSELDRFIVGQNDAKRAVAIALRNRWRRQQLSESLRE--EVLPKNILMIG 59

Query: 122 PTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
           PTG GKT +A  LARL   PF   +AT  TE GYVG DVE I++ L++
Sbjct: 60  PTGVGKTEIARRLARLAQAPFLKVEATKFTEVGYVGRDVEQIVRDLVE 107



 Score = 93.6 bits (231), Expect = 1e-23
 Identities = 110/387 (28%), Positives = 155/387 (40%), Gaps = 81/387 (20%)

Query: 37  ICDECVDLCNDIIREEI-KDVLPKKESAALPTPRKIREHLDDYVIGQEHAKKVLAVAVYN 95
           I  + V++   + RE + K V  K E AA        E L D ++G+    +        
Sbjct: 101 IVRDLVEVAILMTRERLRKQVTAKAEIAA-------EERLLDALVGETAGTETRQ----K 149

Query: 96  HYKRLRNGDTTSEGVEL--------GKSNILLIGPTGS--GKTLLAETLARLLDVPFTMA 145
             K LR G   ++ VE+        G     + G  GS  G   L + L + L    T  
Sbjct: 150 FRKMLREGALDAKEVEIQVAETGGAGLPTFDIPGMPGSQVGMINLGDMLGKALGGGRTRP 209

Query: 146 DATTLTEAGYV--GEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSITRD 203
               + EA  V   E+ + ++ +     D   A    GIV+IDEIDKI  +S    +  D
Sbjct: 210 RKLPVPEALDVLTAEESDKLLDQDKVVKDAIWAVENHGIVFIDEIDKICARSSEHHVGGD 269

Query: 204 VSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQR 263
           VS EGVQ+ LL LIEGT  +       KH       V T  +LFI  GAF          
Sbjct: 270 VSREGVQRDLLPLIEGTTVAT------KHGS-----VKTDHVLFIASGAFH--------- 309

Query: 264 VATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAA 323
                                        +P DL     +PE  GRLP+   L  L    
Sbjct: 310 ---------------------------LAKPSDL-----LPELQGRLPIRVELKALSRDD 337

Query: 324 LIQILCEPKNALTKQYAALFELENVDLEFREDALKAIA-----AKAMKRKTGARGLRSIL 378
           L++IL EP+ +L KQY AL   E V L F   ++ AIA       A     GAR L++++
Sbjct: 338 LVRILTEPEASLLKQYEALLATEEVTLTFEPGSVDAIADLAAEINATVENIGARRLQTVM 397

Query: 379 EAVLLETMYELPSMEEVSKVVIDESVI 405
           E +L E  +  P     + V I   ++
Sbjct: 398 ERLLEEISFTAPDQPPGTTVTITAEMV 424