Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., HslU--HslV peptidase ATPase subunit from Escherichia coli ECRC62

 Score = 91.3 bits (225), Expect = 5e-23
 Identities = 45/101 (44%), Positives = 70/101 (69%), Gaps = 2/101 (1%)

Query: 67  TPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSG 126
           TPR+I   LD ++IGQ++AK+ +A+A+ N ++R++  +      E+   NIL+IGPTG G
Sbjct: 5   TPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRH--EVTPKNILMIGPTGVG 62

Query: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
           KT +A  LA+L + PF   +AT  TE GYVG++V++II+ L
Sbjct: 63  KTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDL 103



 Score = 90.9 bits (224), Expect = 7e-23
 Identities = 79/256 (30%), Positives = 113/256 (44%), Gaps = 60/256 (23%)

Query: 156 VGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLK 215
           + E+   ++     K D   A  + GIV+IDEIDKI ++ E+     DVS EGVQ+ LL 
Sbjct: 226 IEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSG--PDVSREGVQRDLLP 283

Query: 216 LIEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAD 275
           L+EG   S       KH       V T  ILFI  GAF         ++A          
Sbjct: 284 LVEGCTVST------KHGM-----VKTDHILFIASGAF---------QIA---------- 313

Query: 276 VRSKDNSKTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNAL 335
                            +P DL     IPE  GRLP+   L  L  +   +IL EP  ++
Sbjct: 314 -----------------KPSDL-----IPELQGRLPIRVELQALTTSDFERILTEPNASI 351

Query: 336 TKQYAALFELENVDLEFREDALKAIAAKAMK-----RKTGARGLRSILEAVLLETMYELP 390
           T QY AL   E V++EF +  +K IA  A +        GAR L ++LE ++ E  Y+  
Sbjct: 352 TVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDAS 411

Query: 391 SMEEVSKVVIDESVIN 406
            +     ++ID   ++
Sbjct: 412 DLSG-QTIIIDADYVS 426