Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., HslU--HslV peptidase ATPase subunit from Dickeya dianthicola ME23

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 46/101 (45%), Positives = 68/101 (67%), Gaps = 2/101 (1%)

Query: 67  TPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSG 126
           TPR+I   LD Y+IGQ  AK+ +A+A+ N ++R++  +      E+   NIL+IGPTG G
Sbjct: 5   TPREIVSELDSYIIGQHKAKRAVAIALRNRWRRMQLEENLRH--EVTPKNILMIGPTGVG 62

Query: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
           KT +A  LA+L + PF   +AT  TE GYVG++V++II+ L
Sbjct: 63  KTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDL 103



 Score = 89.0 bits (219), Expect = 3e-22
 Identities = 75/219 (34%), Positives = 97/219 (44%), Gaps = 59/219 (26%)

Query: 179 ERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFL 238
           + GIV+IDEIDKI ++ +      DVS EGVQ+ LL L+EG   S       KH      
Sbjct: 249 QHGIVFIDEIDKICKRGDTSG--PDVSREGVQRDLLPLVEGCTVST------KHGM---- 296

Query: 239 QVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLV 298
            V T  ILFI  GAF         +VA+                           P DL 
Sbjct: 297 -VKTDHILFIASGAF---------QVAS---------------------------PSDL- 318

Query: 299 KYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALK 358
               IPE  GRLP+   L  L      +IL EP  +LT+QY AL E E V + F+ D ++
Sbjct: 319 ----IPELQGRLPIRVELQALTTEDFERILTEPSASLTRQYQALLETEGVSITFQPDGIR 374

Query: 359 AIAAKAMK-----RKTGARGLRSILEAVLLETMYELPSM 392
            IA  A +        GAR L ++LE ++ E  Y    M
Sbjct: 375 RIAEAAWQVNERTENIGARRLHTVLERLIEEVSYGASEM 413