Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

 Score =  564 bits (1453), Expect = e-165
 Identities = 288/419 (68%), Positives = 346/419 (82%), Gaps = 4/419 (0%)

Query: 5   SKEGGSSKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKKESAA 64
           S  G S   LYCSFCGKSQHEVRKLIAGP+V+ICDECV+LC DIIREE K  + K     
Sbjct: 7   SNGGDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREENKTSMVKSREG- 65

Query: 65  LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTG 124
           +PTP+ I + LD+YVIGQ+ AKK+L+VAV+NHYKRL +     + VEL KSNI+L+GPTG
Sbjct: 66  VPTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHASKNGD-VELAKSNIMLVGPTG 124

Query: 125 SGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVY 184
            GKT LA+TLAR++DVPFTMADATTLTEAGYVGEDVENII KLLQ  DY+V +A+RGIVY
Sbjct: 125 CGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVY 184

Query: 185 IDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSK 244
           IDE+DKISRKS+NPSITRDVSGEGVQQALLK++EGTVASVPPQGGRKHPQQEFLQVDT+ 
Sbjct: 185 IDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTTN 244

Query: 245 ILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLVKYGLIP 304
           ILFICGGAFAGLDK+I  R    T IGFGA V+++D+ + + E+  ++EPEDLVK+GLIP
Sbjct: 245 ILFICGGAFAGLDKIISAR-GEKTSIGFGATVKAEDD-RRVGEVLRELEPEDLVKFGLIP 302

Query: 305 EFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAKA 364
           EFIGRLPV ATL +LDE ALIQIL EPKNAL KQY  LFE+E+V+L F EDAL+ IA +A
Sbjct: 303 EFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELTFHEDALREIARRA 362

Query: 365 MKRKTGARGLRSILEAVLLETMYELPSMEEVSKVVIDESVINGESAPLLIYSANESQAA 423
           + RKTGARGLRSI+E +LL+TM+ELP++E V +VVI   V++G + PL IY+  + + A
Sbjct: 363 ITRKTGARGLRSIMEKILLDTMFELPTLEGVREVVISNDVVSGVARPLYIYADRQEEKA 421