Pairwise Alignments

Query, 786 a.a., endopeptidase La from Vibrio cholerae E7946 ATCC 55056

Subject, 798 a.a., DNA-binding protein from Pseudomonas simiae WCS417

 Score = 1058 bits (2737), Expect = 0.0
 Identities = 534/767 (69%), Positives = 642/767 (83%), Gaps = 2/767 (0%)

Query: 9   IEIPVLPLRDVVVYPHMVIPLFVGREKSIQCLEAAMDNNKQVLLVAQKKAETDEPKVADL 68
           IE+P+LPLRDVVVYPHMVIPLFVGREKSI+ LEAAM  +KQ+LL+AQK    D+P    L
Sbjct: 5   IELPLLPLRDVVVYPHMVIPLFVGREKSIEALEAAMTGDKQILLLAQKNPADDDPGEDAL 64

Query: 69  FEVGTVATILQLLKLPDGTVKVLVEGQQRAKITQFYEEE-YFFADAQYLVTPELDEREQE 127
           + VGT+AT+LQLLKLPDGTVKVLVEG+QR  + +F E + +  A+   +   E  ERE E
Sbjct: 65  YRVGTIATVLQLLKLPDGTVKVLVEGEQRGAVERFMEVDGHLRAEVALIDEVEAPERESE 124

Query: 128 VVVRSAINQFEGFIKLNKKIPPEVLTSLNGIDEAARLADTIAAHMPLKLVDKQKVLELLD 187
           V VRS ++QFE +++L KK+P EVL+SLN IDE +RL DT+AAHM LK+  KQ +LE++D
Sbjct: 125 VFVRSLLSQFEQYVQLGKKVPAEVLSSLNSIDEPSRLVDTMAAHMALKIEQKQDILEIID 184

Query: 188 VSERLEFLMGQMESEIDLLQVEKRIRTRVKKQMEKSQREYYLNEQMKAIQKELGEMDDAP 247
           +S R+E ++  +++EIDLLQVEKRIR RVKKQME+SQREYYLNEQMKAIQKELG+ ++  
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSEEGH 244

Query: 248 DEFETLKKKIEESKMPKEARDKAEQELHKLKMMSPMSAEATVVRSYIDWMVNVPWTKRSK 307
           +E E LKK+I+ + +PK+A  KA  EL+KLK MSPMSAEATVVRSYIDW+V VPW  ++K
Sbjct: 245 NEIEELKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATVVRSYIDWLVQVPWKAQTK 304

Query: 308 VKKDLSKAEEILNADHYGLERVKERILEYLAVQSRINKLKGPILCLVGPPGVGKTSLGRS 367
           V+ DL++AE+IL+ADHYGLE VKERILEYLAVQ R+ K++GP+LCLVGPPGVGKTSL  S
Sbjct: 305 VRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAES 364

Query: 368 IAAATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKM 427
           IA AT R++VRMALGGVRDEAEIRGHRRTYIGSMPG+LIQKM KVGV+NPLFLLDEIDKM
Sbjct: 365 IANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDKM 424

Query: 428 SSDMRGDPASALLEVLDPEQNNSFNDHYLEVDYDLSDVMFVATSNSMNIPGPLLDRMEVI 487
            SDMRGDPASALLEVLDPEQN++FNDHYLEVDYDLSDVMF+ TSNSMNIP  LLDRMEVI
Sbjct: 425 GSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSNSMNIPPALLDRMEVI 484

Query: 488 RLSGYTEDEKLNIAKDHLVSKQVERNGLKPSEIVIEDSAIVGIIRYYTREAGVRGLEREI 547
           RL GYTEDEK+NIA  +L  KQ+  NGLK  EI  E   I  I+RYYTREAGVRGLER+I
Sbjct: 485 RLPGYTEDEKINIAVKYLAPKQISANGLKKGEIEFEVETIRDIVRYYTREAGVRGLERQI 544

Query: 548 SKICRKAVKKILLDKGVKTVVVNQQNLKEFLGVQRFDYGKAEESNRIGQVNGLAWTEVGG 607
           +KICRKAVK+  L+K   +V V   +L+ FLGV++F YG AE+ +++GQV GLAWT+VGG
Sbjct: 545 AKICRKAVKEHALEKRF-SVKVTADSLEHFLGVKKFRYGLAEQQDQVGQVTGLAWTQVGG 603

Query: 608 DLLTIETQSMPGKGKLTQTGSLGDVMQESIQAAMTVVRSRAEKLGINPDFYEKKDIHVHV 667
           +LLTIE   +PGKG+L +TGSLGDVM ESI AA TVVRSRA+ LGI  DF+EK D H+H+
Sbjct: 604 ELLTIEAAVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRAKSLGIPLDFHEKHDTHIHM 663

Query: 668 PEGATPKDGPSAGIAMCTALVSSLTGNPVKAEVAMTGEITLRGEVLPIGGLKEKLLAAHR 727
           PEGATPKDGPSAG+ MCTALVS+LTG PV+A+VAMTGEITLRG+VL IGGLKEKLLAAHR
Sbjct: 664 PEGATPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHR 723

Query: 728 GGIKTVLIPKDNERDLEEIPDNVIADLQVLPVQWIDEVLKVALEQDP 774
           GGIKTV+IP++N RDL+EIPDN+  DLQ+ PV+WIDEVL++AL+  P
Sbjct: 724 GGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQYAP 770