Pairwise Alignments

Query, 786 a.a., endopeptidase La from Vibrio cholerae E7946 ATCC 55056

Subject, 798 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

 Score = 1061 bits (2745), Expect = 0.0
 Identities = 537/767 (70%), Positives = 645/767 (84%), Gaps = 2/767 (0%)

Query: 9   IEIPVLPLRDVVVYPHMVIPLFVGREKSIQCLEAAMDNNKQVLLVAQKKAETDEPKVADL 68
           +++P+LPLRDVVVYPHMVIPLFVGREKSI+ LEAAM   KQ+LL+AQK    D+P    L
Sbjct: 5   LDLPLLPLRDVVVYPHMVIPLFVGREKSIEALEAAMTGEKQILLLAQKNPADDDPGEDAL 64

Query: 69  FEVGTVATILQLLKLPDGTVKVLVEGQQRAKITQFYEEE-YFFADAQYLVTPELDEREQE 127
           + VGTVAT+LQLLKLPDGTVKVLVEG+QR  + +F E E +  A+   +   +  ERE E
Sbjct: 65  YRVGTVATVLQLLKLPDGTVKVLVEGEQRGAVERFSEVEGHIRAEVSLIDETDTAERESE 124

Query: 128 VVVRSAINQFEGFIKLNKKIPPEVLTSLNGIDEAARLADTIAAHMPLKLVDKQKVLELLD 187
           V VR+ ++QFE +++L KK+P EVL+SLN IDE  RL DT+AAHM LK+  KQ++LE++D
Sbjct: 125 VFVRTLLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIVD 184

Query: 188 VSERLEFLMGQMESEIDLLQVEKRIRTRVKKQMEKSQREYYLNEQMKAIQKELGEMDDAP 247
           ++ R+E ++  +++EIDLLQVEKRIR RVKKQME+SQREYYLNEQMKAIQKELG+ D+  
Sbjct: 185 LTTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDGDEGH 244

Query: 248 DEFETLKKKIEESKMPKEARDKAEQELHKLKMMSPMSAEATVVRSYIDWMVNVPWTKRSK 307
           +E E LKK+IE + +PK+A  KA+ EL+KLK MSPMSAEATVVRSY+DW+V VPW  +SK
Sbjct: 245 NEVEELKKRIEAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYLDWLVQVPWKAQSK 304

Query: 308 VKKDLSKAEEILNADHYGLERVKERILEYLAVQSRINKLKGPILCLVGPPGVGKTSLGRS 367
           V+ DL+KAEEIL+ADHYGLE VKERILEYLAVQ R+ K++GP+LCLVGPPGVGKTSL  S
Sbjct: 305 VRLDLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAES 364

Query: 368 IAAATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKM 427
           IAAAT R++VRMALGGVRDEAEIRGHRRTYIGSMPG+LIQKM KVGV+NPLFLLDEIDKM
Sbjct: 365 IAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDKM 424

Query: 428 SSDMRGDPASALLEVLDPEQNNSFNDHYLEVDYDLSDVMFVATSNSMNIPGPLLDRMEVI 487
            SDMRGDPASALLEVLDPEQN++FNDHYLEVDYDLSDVMF+ TSNSMNIP  LLDRMEVI
Sbjct: 425 GSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSNSMNIPPALLDRMEVI 484

Query: 488 RLSGYTEDEKLNIAKDHLVSKQVERNGLKPSEIVIEDSAIVGIIRYYTREAGVRGLEREI 547
           RL GYTEDEK+NIA  +LV KQV+ NGLK  E+ ++ SAI  IIRYYTREAGVRGLER+I
Sbjct: 485 RLPGYTEDEKINIAVKYLVPKQVKANGLKKEELEVDVSAIRDIIRYYTREAGVRGLERQI 544

Query: 548 SKICRKAVKKILLDKGVKTVVVNQQNLKEFLGVQRFDYGKAEESNRIGQVNGLAWTEVGG 607
           +K+CRK VK+    K VK  V ++Q L+  LGV++F YG AE+ ++IGQV GLAWT+VGG
Sbjct: 545 AKVCRKVVKEHTGQKQVKVKVASEQ-LEHLLGVRKFRYGLAEQQDQIGQVTGLAWTQVGG 603

Query: 608 DLLTIETQSMPGKGKLTQTGSLGDVMQESIQAAMTVVRSRAEKLGINPDFYEKKDIHVHV 667
           +LLTIE   +PGKG+L +TGSLGDVM ESI AA TVVRSRA  LGI  DF+EK D+H+H+
Sbjct: 604 ELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAADFHEKHDVHIHM 663

Query: 668 PEGATPKDGPSAGIAMCTALVSSLTGNPVKAEVAMTGEITLRGEVLPIGGLKEKLLAAHR 727
           PEGATPKDGPSAGI MCTALVS+LT  PV+A+VAMTGEITLRG+VL IGGLKEKLLAAHR
Sbjct: 664 PEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHR 723

Query: 728 GGIKTVLIPKDNERDLEEIPDNVIADLQVLPVQWIDEVLKVALEQDP 774
           GGIKTV+IP++N RDL+EIP+N+  DLQ+ PV+WIDEVL++AL+  P
Sbjct: 724 GGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQYAP 770