Pairwise Alignments

Query, 619 a.a., peptidylprolyl isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., molecular chaperone SurA from Pseudomonas simiae WCS417

 Score = 73.6 bits (179), Expect = 2e-17
 Identities = 77/316 (24%), Positives = 142/316 (44%), Gaps = 50/316 (15%)

Query: 89  KSVLDRMVNDLLLEQHAASLGLRVSDEQVRQLILEIPQFQSQGVFDSTAYQATLRRAGFT 148
           + VL+R++ + L  Q     G+R+SDE++ Q +  I Q  +  +     ++A L   G +
Sbjct: 76  QQVLERLIVENLQLQIGDRSGIRISDEELNQAVGTIAQRNNMSI---DQFRAALAHDGLS 132

Query: 149 PEMYAEYLRKDLV-----RNQLMSALQGSE-------------FSLAGEVNLQDQLI--- 187
            E   + +R++++     + ++   +Q SE               L+ E++L + LI   
Sbjct: 133 YEDARDQIRREMIISRVRQRRVAERVQVSEQEVKNFLASDLGKMQLSEELHLANILIPTP 192

Query: 188 ------------SQTRDIRTITLSLEDFAKKVTLSDEEIDQYYKTNTERFTRPEQVKVSY 235
                       ++T+ I     +  DFA+ + ++    D   +     + +  Q+   +
Sbjct: 193 DSANSEQLNAAAAKTQAIYERLKAGADFAQ-MAIAQSGSDNALEGGDMGWRKAAQLPPPF 251

Query: 236 V-ELSADGLKAQVSVDDAAAQQYYQEHLDKY----STAEQRNVSHILI-------EGNDE 283
             ELSA  +                + L+K     S  ++ +V HIL+       E   +
Sbjct: 252 DRELSAMEVGGITQPARTPGGFIILKLLEKRGGETSLKDEVHVRHILVKPSEIRTEAQTK 311

Query: 284 QKAQAILDELNAGADFATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQ 343
           + AQ I D + +G DFATLAK  S+D GSA  GG L WI+P  + P F+    A T +G 
Sbjct: 312 ELAQKIYDRIESGEDFATLAKSFSEDPGSALNGGDLNWIDPKALVPEFQ-QVMADTPQGV 370

Query: 344 VSGLVKSDFGYHIIRL 359
           +S   K+ +G+H++ +
Sbjct: 371 LSKPFKTQYGWHVLEV 386



 Score = 54.7 bits (130), Expect = 8e-12
 Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 40/210 (19%)

Query: 184 DQLISQTRDIRTITLSLEDFAKKVTLSDEEIDQYYKTNTERFTRP-EQVKVSYVELSADG 242
           DQ + +   +  + L + D    + +SDEE++Q   T  +R     +Q + +   L+ DG
Sbjct: 75  DQQVLERLIVENLQLQIGD-RSGIRISDEELNQAVGTIAQRNNMSIDQFRAA---LAHDG 130

Query: 243 LKAQ-----------------------VSVDDAAAQQYYQEHLDKYSTAEQRNVSHILI- 278
           L  +                       V V +   + +    L K   +E+ ++++ILI 
Sbjct: 131 LSYEDARDQIRREMIISRVRQRRVAERVQVSEQEVKNFLASDLGKMQLSEELHLANILIP 190

Query: 279 ---EGNDEQ------KAQAILDELNAGADFATLAKEKSQDLGSAAEGGSLGWIEPDTMDP 329
                N EQ      K QAI + L AGADFA +A  +S    +A EGG +GW +   + P
Sbjct: 191 TPDSANSEQLNAAAAKTQAIYERLKAGADFAQMAIAQSGS-DNALEGGDMGWRKAAQLPP 249

Query: 330 AFEAAAFALTEKGQVSGLVKSDFGYHIIRL 359
            F+    A+ E G ++   ++  G+ I++L
Sbjct: 250 PFDRELSAM-EVGGITQPARTPGGFIILKL 278