Pairwise Alignments

Query, 619 a.a., peptidylprolyl isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) from Variovorax sp. SCN45

 Score =  247 bits (630), Expect = 1e-69
 Identities = 173/559 (30%), Positives = 275/559 (49%), Gaps = 45/559 (8%)

Query: 1   MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYLISGGNNAAAKVGNAEISRGDFEQAYQ 60
           M +  R+    + + + L LII SF+F GV  Y   GG+   A++   +I+R +++Q ++
Sbjct: 1   MFEAFRKHTKIVMIFLFL-LIIPSFVFFGVERYQGFGGDEKVARIEGHDITRPEWDQQHR 59

Query: 61  NERNRMQAQLGDYFSNLLADPTYVAS--FRKSVLDRMVNDLLLEQHAASLGLRVSDEQVR 118
            E +R++ Q  +       DPT + S   R + L+RMV D +L   AA   + VS++++ 
Sbjct: 60  VETDRIRQQSPN------VDPTLLESDALRYATLERMVRDRVLAAAAAKANMTVSEDRLS 113

Query: 119 QLILEIPQFQS----QGVFDSTAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEF 174
           ++  + P   S     G FD   +Q   R  G TPE Y   +R D+   Q+M  + G+ F
Sbjct: 114 RIFAQDPGLASFRTPDGKFDRETFQ---RVTGRTPEQYEASVRADMATQQVMLGISGTAF 170

Query: 175 SLAGEVNLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIDQYYKTNTERFTRPEQVKVS 234
           +              +R+I+    + E FA KVT+SD +I+ YYK +  +F  PEQ  + 
Sbjct: 171 TSPALAATTINAFYDSREIQVARFNPETFASKVTVSDADIEAYYKDHASQFQAPEQANIE 230

Query: 235 YVELSADGLKAQVSVDDAAAQQYYQEHLDKYSTAEQRNVSHILIEG----------NDEQ 284
           Y+ L  D  K  +SV++   + YY+E+  ++ T E+R  SHILI              + 
Sbjct: 231 YLVLDLDAAKKNISVNEDDLKTYYKENAARFGTKEERRASHILITAPSSMPAADREKAKA 290

Query: 285 KAQAILDEL-NAGADFATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQ 343
           KA+A+L E+  A   FA +A++ SQD GSA +GG L ++    M   FE A FAL +KG+
Sbjct: 291 KAEALLAEVKKAPNTFADVARKNSQDPGSAEKGGDLDFVTRGAMVKPFEDAMFAL-KKGE 349

Query: 344 VSGLVKSDFGYHIIRLDDIKAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMAFE 403
           +S +++++FGYHII L DIK  VV P+ +V   I+ ++  QQA   F           ++
Sbjct: 350 ISNVIETEFGYHIIHLTDIKPAVVPPFEQVRATIESDVRSQQATQEFAKAAEAFTDAVYQ 409

Query: 404 HSDSLDEAAKAISATVVHTDFISAEQAPEV---LTTPAVLQALKSPEVKEDGLNSEVIEV 460
             DSL  AA  +  T+   + ++    P     L +   L AL +P+  +   N+E IEV
Sbjct: 410 TPDSLKPAADKLKLTIQTANNVARTPVPGATGPLASRNFLNALFAPDSLQRKQNTEAIEV 469

Query: 461 APEHVVVVRVEEFRPETVLPLDEVKSQVVEQLSRMKGEQQALELGNQLVTALKAGETDLL 520
               +   RV  + P   +PL EVK ++  QL   +            V A   GE  L 
Sbjct: 470 GANQLASGRVTTYAPAHPVPLAEVKDKIRAQLINERA----------AVLAKTEGEAKLA 519

Query: 521 A----QKGVSFGELQMIDR 535
           A      G +FG    + R
Sbjct: 520 AWTTKADGATFGAPMTVSR 538