Pairwise Alignments

Query, 619 a.a., peptidylprolyl isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 55.8 bits (133), Expect = 4e-12
 Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 2/65 (3%)

Query: 297 ADFATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHI 356
           A F  LA+E SQD GSA +GG LGW  P    P FE A  AL   G++S  + S FG H+
Sbjct: 350 ASFEALAREHSQD-GSADQGGDLGWAGPGMFVPEFEQAMNAL-RPGEMSAPLVSRFGVHL 407

Query: 357 IRLDD 361
           IR+D+
Sbjct: 408 IRVDE 412



 Score = 49.3 bits (116), Expect = 4e-10
 Identities = 74/342 (21%), Positives = 146/342 (42%), Gaps = 39/342 (11%)

Query: 190 TRDIRTITLSLEDFAKKVTLSDEEIDQYYKT---NTERFTRPEQVKVSYVELSADGLKAQ 246
           T D   IT + +  A +  LS E + +       +  RF    + ++    +    + ++
Sbjct: 119 TVDEAAITQAEQAIAAQNQLSPEALRRRLAAEGMDLNRFRNDLRNQILLQRVQERQVDSR 178

Query: 247 VSVDDAAAQQYYQEHLDKYSTAE-QRNVSHILI---EGNDEQK-------AQAILDELNA 295
           V V DA    + +E       A  + N++H+L+   EG   ++       AQ + +   A
Sbjct: 179 VRVTDADIDDFLREQRGSNELANLELNLAHVLVAVPEGASPERLQELQARAQGVAERARA 238

Query: 296 GADFATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYH 355
           GADFA LA+E S D      GG  G + P +  P     A      G V+G ++S  G+H
Sbjct: 239 GADFALLAREFS-DAPERTNGGVFG-MRPASRLPTLFVDATRALNTGGVAGPLRSPAGFH 296

Query: 356 IIRLDDIKAPVVKPYSEVEQAIKQELI----DQQALDSFYAKQSELEKMAFEHSDSLDEA 411
           ++++ + K     P + V Q   + ++     Q +     A+ ++  +       S +  
Sbjct: 297 VLKVIE-KKQAGMPDTVVTQTRARHILLRPGPQLSQSDAVARLADFRQKIAGGQASFEAL 355

Query: 412 AKAISATVVHTDFISAEQAPEV------LTTPAVLQALKSPEVKEDGLNSEVIEVAPEHV 465
           A+       H+   SA+Q  ++      +  P   QA+ +  ++   +++ ++     H 
Sbjct: 356 ARE------HSQDGSADQGGDLGWAGPGMFVPEFEQAMNA--LRPGEMSAPLVSRFGVH- 406

Query: 466 VVVRVEEFRPETVLPLDEVKSQVVEQLSRMKGEQQALELGNQ 507
            ++RV+E R  T+   ++    +V  L+R K  + AL + +Q
Sbjct: 407 -LIRVDERRQATLTQREQ--RDIVRGLAREKKIEDALRVWSQ 445