Pairwise Alignments

Query, 619 a.a., peptidylprolyl isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  426 bits (1095), Expect = e-123
 Identities = 248/627 (39%), Positives = 363/627 (57%), Gaps = 14/627 (2%)

Query: 1   MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYLISGGNNAAAKVGNAEISRGDFEQAYQ 60
           MMD LR   NS+ +KII  +II+SFI  GV  YLI G NN AAKV   EISR  FE A+ 
Sbjct: 1   MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYLIGGSNNYAAKVNGQEISRAQFENAFN 60

Query: 61  NERNRMQAQLGDYFSNLLADPTYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQL 120
           NERNRMQ QLGD +S L A+  Y+ S R+ VL+R++++ LL+Q++  L L +SDEQV+Q 
Sbjct: 61  NERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQA 120

Query: 121 ILEIPQFQSQGVFDSTAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEFSLAGEV 180
           I   P FQ  G FD+  Y A + + G T + YA+ LR  L   QL++ + G++F L GE 
Sbjct: 121 IFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGET 180

Query: 181 NLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIDQYYKTNTERFTRPEQVKVSYVELSA 240
           +    L+SQ R +R   + +   A K  ++D+E+  YY  N  RF  PEQ +VSY++L A
Sbjct: 181 DELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDA 240

Query: 241 DGLKAQVSVDDAAAQQYYQEHLDKYSTAEQRNVSHILIEGNDEQKAQAILDELNAGADFA 300
             ++A VS  DA  Q YY +H+D+++  E+  + + +I+   E  A+A+LD LN G DFA
Sbjct: 241 ATMQAPVS--DADIQAYYDQHVDQFTQPER--IRYSIIQTKTEDDAKAVLDALNKGEDFA 296

Query: 301 TLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRLD 360
           TLAKEKS D+ SA  GG +GW+E     P  + A   L EKGQ+SG++KS  G+ + RLD
Sbjct: 297 TLAKEKSTDIISARNGGDMGWLEESATVPELKNA--GLKEKGQISGVIKSSVGFLVARLD 354

Query: 361 DIKAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMAFEHSDSLDEAAKAISATVV 420
           DI+   VKP SEV   I  ++  ++ALD++YA Q ++   A   ++SL  A +      V
Sbjct: 355 DIQPAKVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAASNDNESLAGAEQVAGVKAV 414

Query: 421 HTDFISAEQAPEVLTTPAVLQALKS----PEVKEDGLNSEVIEVAPEHVVVVRVEEFRPE 476
            T + S +  PE L    V  A+ +     E    G NS++I V  +   VVRV E +PE
Sbjct: 415 ETGWFSRDTLPEELNFKPVADAIFNGGLVGENGTPGPNSDIITVDGDRAFVVRVSEHKPE 474

Query: 477 TVLPLDEVKSQVVEQLSRMKGEQQALELGNQLVTALKAGE-TDLLAQKGVSFGELQMIDR 535
            V PL EVK QV   +   K EQQA     +L+  LKAG+  + +   G+SFGE + + R
Sbjct: 475 AVKPLAEVKEQVTALVKHNKAEQQAKLDAEKLLVELKAGKGAEAMKAAGLSFGEPKTLSR 534

Query: 536 SS--PLANTVYAMVKPQEGEKVYAQAKDFDGNIVVIELSKVESKLTPAYHEQIATQ-LER 592
           +S  P++   +A+  P + + VY  A D  GN+V++   +V++   P   ++   Q + +
Sbjct: 535 TSQDPVSQAAFALSLPTKDKPVYGVANDMQGNVVLLAFDEVKAGAMPEAQKKAMVQGITQ 594

Query: 593 IGSQQDLAGVISVLRQNTDIEYHIATE 619
             +Q     ++S LR+   I+   A E
Sbjct: 595 NNAQIVFEALMSNLRKEAKIKIGDALE 621