Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., 30S ribosomal protein S1 from Xanthobacter sp. DMC5

 Score =  560 bits (1443), Expect = e-164
 Identities = 273/551 (49%), Positives = 384/551 (69%), Gaps = 3/551 (0%)

Query: 3   ESFAQLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGELEV 62
           E FA L +E        +G++VKG VVAIE    ++D GLK+E  +   +F     E  +
Sbjct: 9   EDFAALLDESFGRADTNEGSVVKGIVVAIEKDLAIIDIGLKTEGRVALREFAGPGRENAI 68

Query: 63  QVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGFTV 122
           +VG +V+V L+ VE+  GE  LSR+KA+R E+W+ LEKA+     V G+I  +VKGGFTV
Sbjct: 69  KVGDEVEVYLERVENAMGEAVLSRDKARREESWVKLEKAFTANEKVFGVIFNQVKGGFTV 128

Query: 123 ELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSVER 182
           +L+G  AFLP S VD+RPIRD   L + +  F+++K+D++R N+VVSRR V+E   + +R
Sbjct: 129 DLDGAVAFLPRSQVDIRPIRDVGPLMHNQQPFQILKMDRRRGNIVVSRRTVLEETRAEQR 188

Query: 183 DELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIL 242
            EL++ L+EG  + G+VKN+TDYGAFVDLGG+DGLLH+TD+AW+RV HP+E++N+G  + 
Sbjct: 189 HELVQNLEEGQAIDGVVKNITDYGAFVDLGGIDGLLHVTDIAWRRVNHPTEVLNIGQTVK 248

Query: 243 VKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGVEG 302
           VK++K + +  R+SLG+KQL  DPW  I  +YP   +  GRVTN+TDYG FVE+E G+EG
Sbjct: 249 VKIIKINHETHRISLGMKQLLGDPWEGIEAKYPVEARFKGRVTNITDYGAFVELEPGIEG 308

Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFAEAQA 362
           L+HVSEM WT KN+HP K+V+   EVEV VL++D  +RRISLGLKQ   NPW++FAE  A
Sbjct: 309 LIHVSEMSWTKKNVHPGKIVSTSQEVEVQVLEVDSAKRRISLGLKQTLQNPWEAFAEKYA 368

Query: 363 KGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVLAV 422
            G  V G++K+ T+FG+F+GL+G +DG+VHLSD+ WN PGE+ + E++KGD + AVVL V
Sbjct: 369 PGAVVEGEVKNKTEFGLFLGLDGDVDGMVHLSDLDWNRPGEQVIDEYRKGDMVKAVVLDV 428

Query: 423 DAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELE-DGVEGYIRAS 481
           D E+ERISLGIKQ+  DPF A   + KKGA+V   VT V   G  ++L    +  +I+ S
Sbjct: 429 DVEKERISLGIKQLAGDPF-ADAGEVKKGAVVTCEVTDVKDGGIEVKLTGTDLSAFIKRS 487

Query: 482 EVSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATLNKQDE-A 540
           E++RDR +      +VGDK++A+ T  DRK R + +SIKA + AEE+E +A    QD  A
Sbjct: 488 ELARDRNDQRPERFSVGDKLDARVTLFDRKARKVQVSIKAMEIAEEREAVAQFGSQDSGA 547

Query: 541 AFGNAMADAFK 551
           + G+ +  A K
Sbjct: 548 SLGDILGAALK 558