Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., SSU ribosomal protein S1p from Variovorax sp. SCN45

 Score =  696 bits (1796), Expect = 0.0
 Identities = 334/537 (62%), Positives = 427/537 (79%)

Query: 1   MTESFAQLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGEL 60
           M+ESFA LFEE L  ++ + G ++   VV +E+ +V+V+AGLKSE+ +P E+FKN  GEL
Sbjct: 1   MSESFADLFEESLKRSEMRTGEVITAEVVRVEHNHVVVNAGLKSEAYVPIEEFKNDKGEL 60

Query: 61  EVQVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGF 120
           EVQ G  V VA+ +VE+G+G+T LSR+ AKR  +W+ LEKA E    V G  +GKVKGG 
Sbjct: 61  EVQAGDFVSVAIGSVENGYGDTILSRDTAKRLASWLALEKALESGDFVTGTTSGKVKGGL 120

Query: 121 TVELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSV 180
           TV +NGIRAFLPGSL+D RPI+D    ENK LEFKVIKLD+KRNNVV+SRRAV+E+    
Sbjct: 121 TVLVNGIRAFLPGSLIDTRPIKDLTPYENKTLEFKVIKLDRKRNNVVLSRRAVVEASMGE 180

Query: 181 ERDELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240
           ER +L+ETL+EG  V+G+VKN+T+YGAFVDLGG+DGLLHITDMAW+RV+HPSE+V  G E
Sbjct: 181 ERAKLMETLKEGAVVRGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVRHPSEVVQAGQE 240

Query: 241 ILVKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGV 300
           I  K+LKFD ++ RVSLGLKQ+G+DPW+ +++RYP+  +L G+VTN+ DYG FVE+E G+
Sbjct: 241 ITAKILKFDTEKNRVSLGLKQMGDDPWMGVSRRYPQSTRLFGKVTNIADYGAFVELEPGI 300

Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFAEA 360
           EGLVHVSEMDWTNKNI P+K+V++GDEVEVMVL+IDE++RRISLG+KQCKANPWQ FA+ 
Sbjct: 301 EGLVHVSEMDWTNKNIAPNKIVSLGDEVEVMVLEIDEDKRRISLGMKQCKANPWQEFAQN 360

Query: 361 QAKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVL 420
             +GD+V G IKSITDFG+F+GL  GIDGLVHLSD+SWN  GE AVR +KKG E+ A+VL
Sbjct: 361 TKRGDRVKGPIKSITDFGVFVGLAAGIDGLVHLSDLSWNEAGETAVRNYKKGQEVEAIVL 420

Query: 421 AVDAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELEDGVEGYIRA 480
           AVD +RERISLGIKQ+++DPF  + + N KG +V G V  VDA+GA I+L + + GY+RA
Sbjct: 421 AVDVDRERISLGIKQLDSDPFTTFTTVNDKGQIVTGKVKTVDARGAEIDLGEDIIGYLRA 480

Query: 481 SEVSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATLNKQ 537
           SE+SRDR+EDA  +L  GD+V A    VDRK R I LSIK KD  +EQ  MA+L++Q
Sbjct: 481 SEISRDRVEDARNVLKEGDEVTAIVVNVDRKTRNIQLSIKQKDMVDEQGAMASLSQQ 537