Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., 30S ribosomal protein S1 from Pseudomonas putida KT2440

 Score =  802 bits (2071), Expect = 0.0
 Identities = 399/553 (72%), Positives = 461/553 (83%)

Query: 1   MTESFAQLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGEL 60
           M+ESFA+LFEE L     Q G I+ G VV I+  +V V AGLKSE  IP EQF N AGEL
Sbjct: 19  MSESFAELFEESLKTLNLQPGAIITGIVVDIDGDWVTVHAGLKSEGVIPLEQFYNEAGEL 78

Query: 61  EVQVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGF 120
            ++VG +V VALDAVEDGFGET+LSREKAKR E WIVLE A+     V G+INGKVKGGF
Sbjct: 79  TIKVGDEVHVALDAVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKGGF 138

Query: 121 TVELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSV 180
           TV++NGIRAFLPGSLVDVRP+RDT HLE KELEFKVIKLDQKRNNVVVSRR+V+E+E+S 
Sbjct: 139 TVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAENSA 198

Query: 181 ERDELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240
           ER+ LLETLQEG +VKGIVKNLTDYGAFVDLGG+DGLLHITDMAWKR+KHPSEIVNVGDE
Sbjct: 199 EREALLETLQEGQQVKGIVKNLTDYGAFVDLGGIDGLLHITDMAWKRIKHPSEIVNVGDE 258

Query: 241 ILVKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGV 300
           + V+VLKFDR+R RVSLGLKQ+GEDPWVAI  RYPEG ++  RVTNLTDYGCF E+EEGV
Sbjct: 259 VDVRVLKFDRERNRVSLGLKQMGEDPWVAITARYPEGTRVQARVTNLTDYGCFAELEEGV 318

Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFAEA 360
           EGLVHVSEMDWTNKNIHPSKVV VGDEVEVMVLDIDEERRRISLG+KQCK+NPW+ F+  
Sbjct: 319 EGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFSGQ 378

Query: 361 QAKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVL 420
             KGDK+TG IKSITDFGIFIGL+GGIDGLVHLSDISWN  GEEAVR FKKGDE+  V+L
Sbjct: 379 FNKGDKITGTIKSITDFGIFIGLDGGIDGLVHLSDISWNETGEEAVRRFKKGDELETVIL 438

Query: 421 AVDAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELEDGVEGYIRA 480
           +VD ERERISLGIKQ+E+DPF+ +V+ N KGA+V G V  VDAKGA + L D +E  ++A
Sbjct: 439 SVDPERERISLGIKQLEDDPFSNFVAVNDKGAIVKGIVKEVDAKGAIVTLADDIEATLKA 498

Query: 481 SEVSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATLNKQDEA 540
           SE+SRDR+EDA  +L  G+++EAK   VDRK+RVI+LSIK+KD+AEE+E + +L    EA
Sbjct: 499 SEISRDRVEDARNVLKEGEEIEAKIISVDRKSRVISLSIKSKDDAEEREAIQSLKNAPEA 558

Query: 541 AFGNAMADAFKAA 553
           A    MA   + A
Sbjct: 559 AADTTMAALLREA 571