Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 756 a.a., RNA-binding transcriptional accessory protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 68.2 bits (165), Expect = 1e-15
 Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 1/91 (1%)

Query: 171 RAVIESESSVERDELLETLQEGTEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVK 229
           R   E+ S  E    ++ L+ G ++ GIV N+T +GAFVD+G   DGL+H++ ++ + V 
Sbjct: 620 RETFEAFSFTEGVNEIKDLRAGMKLPGIVTNITAFGAFVDIGVHQDGLVHVSHLSDRFVS 679

Query: 230 HPSEIVNVGDEILVKVLKFDRDRTRVSLGLK 260
           +P E+V VG ++ V VL+ D  R R+SL +K
Sbjct: 680 NPHEVVKVGQKVEVTVLEVDEARKRISLSMK 710



 Score = 65.5 bits (158), Expect = 7e-15
 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 1/71 (1%)

Query: 277 GHKLSGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDID 336
           G KL G VTN+T +G FV+I    +GLVHVS +     + +P +VV VG +VEV VL++D
Sbjct: 641 GMKLPGIVTNITAFGAFVDIGVHQDGLVHVSHLSDRFVS-NPHEVVKVGQKVEVTVLEVD 699

Query: 337 EERRRISLGLK 347
           E R+RISL +K
Sbjct: 700 EARKRISLSMK 710



 Score = 43.9 bits (102), Expect = 2e-08
 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 364 GDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVLAVD 423
           G K+ G + +IT FG F+ +    DGLVH+S +S            K G ++   VL VD
Sbjct: 641 GMKLPGIVTNITAFGAFVDIGVHQDGLVHVSHLSDRFVSNPH-EVVKVGQKVEVTVLEVD 699

Query: 424 AERERISLGIK 434
             R+RISL +K
Sbjct: 700 EARKRISLSMK 710