Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., 30S ribosomal protein S1 from Magnetospirillum magneticum AMB-1

 Score =  577 bits (1486), Expect = e-169
 Identities = 283/553 (51%), Positives = 388/553 (70%), Gaps = 2/553 (0%)

Query: 3   ESFAQLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGELEV 62
           + FA L +E L      +G+++ GT+V I+    ++D GLKSE  +P ++F  A    ++
Sbjct: 11  DDFAALLDETLGVGGSFEGSVITGTIVEIDGDVAVIDVGLKSEGRVPLKEFATAGRAADI 70

Query: 63  QVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGFTV 122
           + G QVDV ++  ED  GE  LSREKAKR EAW +LEK++E    V G+I G+VKGGFTV
Sbjct: 71  KAGDQVDVFVERYEDRNGEVVLSREKAKREEAWTLLEKSFEAQQRVTGVIFGRVKGGFTV 130

Query: 123 ELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSVER 182
           +L+G  AFLPGS VD+RP+RD   L      F+++K+D+ R N+VVSRRAV+E   + +R
Sbjct: 131 DLSGAVAFLPGSQVDIRPVRDITPLLGTPQPFQILKMDRSRGNIVVSRRAVLEETRAEQR 190

Query: 183 DELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIL 242
            EL+E L+EG  ++G+VKN+TDYGAFVDLGGVDGLLH+TD+AWKR+ HPSE +++G  + 
Sbjct: 191 SELIENLKEGQILEGVVKNITDYGAFVDLGGVDGLLHVTDIAWKRINHPSEALHIGQTVK 250

Query: 243 VKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGVEG 302
           V+V++F+ +  R+SLG+KQL  DPW  +  +YP   K SGRVTN+TDYG FVE+E GVEG
Sbjct: 251 VQVIRFNSETQRISLGIKQLDADPWEGVEAKYPVNAKFSGRVTNITDYGAFVELEPGVEG 310

Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFAEAQA 362
           LVHVSEM WT KN+HP K+V+   EVEVMVLD+D ++RRISLGLKQ   NPW+ F +   
Sbjct: 311 LVHVSEMSWTKKNVHPGKIVSTSQEVEVMVLDVDPQKRRISLGLKQTMNNPWEGFLDRFP 370

Query: 363 KGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVLAV 422
           +G  V G+IK+IT+FG+FIGL G IDG+VHLSD+ W  PGE+A++ FKKGD + A VL V
Sbjct: 371 QGTLVEGEIKNITEFGLFIGLPGDIDGMVHLSDLDWATPGEQAIQNFKKGDVVKAKVLDV 430

Query: 423 DAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELEDGVEGYIRASE 482
           D E+ERISLGIKQ+  DP+   V+  KKG +V  TVT V   G  + +E G+ G+IR SE
Sbjct: 431 DVEKERISLGIKQLGADPYQDAVASIKKGDVVTCTVTQVTENGLEVTVE-GMTGFIRKSE 489

Query: 483 VSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATLNKQDE-AA 541
           +SR+R E       VG+K++AK T  ++  R I LS+KA++  EE++ MA     D  A+
Sbjct: 490 LSRERSEQRPERFAVGEKLDAKITAFEKAARKITLSVKAREVEEEKQAMAEYGSSDSGAS 549

Query: 542 FGNAMADAFKAAK 554
            G+ +  A + A+
Sbjct: 550 LGDILGAAMRKAQ 562