Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., 30S ribosomal protein S1 from Dickeya dianthicola ME23

 Score =  934 bits (2413), Expect = 0.0
 Identities = 468/557 (84%), Positives = 516/557 (92%), Gaps = 1/557 (0%)

Query: 1   MTESFAQLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGEL 60
           MTESFAQLFEE L E + + G+IV+G VVAI+   VLVDAGLKSESAIP EQFKNA GE+
Sbjct: 1   MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDIVLVDAGLKSESAIPVEQFKNAQGEI 60

Query: 61  EVQVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGF 120
           E+QVG +VDVALDAVEDGFGET LSREKAKRHEAW++LEKAYEE+ATV G+INGKVKGGF
Sbjct: 61  EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWLMLEKAYEESATVTGVINGKVKGGF 120

Query: 121 TVELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSV 180
           TVELNGIRAFLPGSLVDVRP+RDT HLE KELEFKVIKLDQKRNNVVVSRRAVIESE+S 
Sbjct: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180

Query: 181 ERDELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240
           ERD+LLE LQEG EVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
Sbjct: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240

Query: 241 ILVKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGV 300
           I VKVLKFDR+RTRVSLGLKQLGEDPWVAIAKRYPEG +L+GRVTNLTDYGCFVEIEEGV
Sbjct: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTRLTGRVTNLTDYGCFVEIEEGV 300

Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFAEA 360
           EGLVHVSEMDWTNKNIHPSKVVNVGD VEVMVLDIDEERRRISLGLKQCK+NPWQ FAE 
Sbjct: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKSNPWQQFAET 360

Query: 361 QAKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVL 420
             KGD+V GKIKSITDFGIFIGL+GGIDGLVHLSDISWNV GEEAVRE+KKGDEI+AVVL
Sbjct: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420

Query: 421 AVDAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELEDGVEGYIRA 480
            VDAERERISLG+KQ+  DPFN Y+S NKKGA+V G VTAVDAKGAT+EL DGVEGY+RA
Sbjct: 421 QVDAERERISLGVKQLAEDPFNNYLSVNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480

Query: 481 SEVSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATL-NKQDE 539
           SE SRDRIEDA+L+L+VGD+VEAK+TGVDRKNRV++LS++AKDEA+E++ +A++ NKQ+E
Sbjct: 481 SEASRDRIEDATLVLSVGDEVEAKYTGVDRKNRVVSLSVRAKDEADEKDAIASVNNKQEE 540

Query: 540 AAFGNAMADAFKAAKGE 556
           + F +AMA+AFKAAKGE
Sbjct: 541 SNFSSAMAEAFKAAKGE 557