Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 750 a.a., Transcriptional accessory protein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 62.8 bits (151), Expect = 5e-14
 Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 171 RAVIESESSVERDELLETLQEGTEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVK 229
           R   E  S  E    ++ L+ G ++ GI+ N+T++GAFVD+G   DGL+H++ +A + + 
Sbjct: 618 RETFEVFSFQEGVNEMKDLKVGMKLPGIITNITNFGAFVDVGVHQDGLVHLSHLADRYIS 677

Query: 230 HPSEIVNVGDEILVKVLKFDRDRTRVSLGLK 260
            P+E+V V  ++ V V++ D +R R+ L +K
Sbjct: 678 DPNEVVTVNQKVEVTVMEVDLNRKRIGLSMK 708



 Score = 58.2 bits (139), Expect = 1e-12
 Identities = 33/91 (36%), Positives = 57/91 (62%), Gaps = 6/91 (6%)

Query: 277 GHKLSGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDEVEVMVLDI 335
           G KL G +TN+T++G FV++    +GLVH+S +   ++ I  P++VV V  +VEV V+++
Sbjct: 639 GMKLPGIITNITNFGAFVDVGVHQDGLVHLSHL--ADRYISDPNEVVTVNQKVEVTVMEV 696

Query: 336 DEERRRISLGLKQCKANPWQSFAEAQAKGDK 366
           D  R+RI L +K     P+   ++ ++ G K
Sbjct: 697 DLNRKRIGLSMKSA---PFAERSKGKSGGAK 724



 Score = 39.7 bits (91), Expect = 4e-07
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 5/73 (6%)

Query: 364 GDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDIS--WNVPGEEAVREFKKGDEISAVVLA 421
           G K+ G I +IT+FG F+ +    DGLVHLS ++  +     E V   +K   +   V+ 
Sbjct: 639 GMKLPGIITNITNFGAFVDVGVHQDGLVHLSHLADRYISDPNEVVTVNQK---VEVTVME 695

Query: 422 VDAERERISLGIK 434
           VD  R+RI L +K
Sbjct: 696 VDLNRKRIGLSMK 708