Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., Ribosomal protein S1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  405 bits (1041), Expect = e-117
 Identities = 203/514 (39%), Positives = 328/514 (63%), Gaps = 11/514 (2%)

Query: 7   QLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGELEVQVGS 66
           +L++E L  T+  +  ++KGTVV I +  V+++ G KS+  +P  +F++     ++++G 
Sbjct: 31  KLYDETL--TEISEKEVIKGTVVGINDKDVIINIGFKSDGLVPRTEFRDLP---DLKIGD 85

Query: 67  QVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGFTVELNG 126
           +V++ ++  E+  G+  LSR+KAK   AW  +E A E    + G++  + KGG  V++ G
Sbjct: 86  EVELFIEEQENALGQLVLSRKKAKMVRAWQDIEDALEYDNVIEGLVKRRTKGGLIVDIYG 145

Query: 127 IRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSVERDELL 186
           + AFLPGS +DV+PIRD      K++E KV+K++   +NVVVS + +IE +   ++ E+L
Sbjct: 146 VEAFLPGSQIDVKPIRDFDVYVGKKMEVKVVKINHANDNVVVSHKVLIEKDLEKQKAEIL 205

Query: 187 ETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEILVKVL 246
             L++G  ++G++KN+T++G F+DLGGVDGLLHITD++W R+ HP E++N+ D++ V VL
Sbjct: 206 NNLEKGQVLEGVIKNMTNFGVFIDLGGVDGLLHITDISWGRINHPEEVLNLDDKVQVVVL 265

Query: 247 KFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGVEGLVHV 306
            FD D+ R+SLG+KQL   PW +++     G K+ G++ N+ DYG F+E+  GVEGL+HV
Sbjct: 266 DFDDDKKRISLGMKQLTAHPWDSLSAELEVGSKVKGKIVNVADYGAFLELAPGVEGLIHV 325

Query: 307 SEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPW--QSFAEAQAKG 364
           SEM W+    +P+  V VGDE+E +VL +D+E R++SLG+KQ   +PW  Q      A G
Sbjct: 326 SEMSWSQHLRNPADFVKVGDEIEAVVLTLDKEERKMSLGIKQLTEDPWTKQDMVTKYAVG 385

Query: 365 DKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVLAVDA 424
            K  G ++++T+FG+F+ LE GIDGLVH+SD+SW    +      K  DE+  VVL +D 
Sbjct: 386 TKHQGVVRNLTNFGLFLELEEGIDGLVHVSDLSWTKKIKHPSEYVKVNDELEVVVLELDV 445

Query: 425 ERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELEDGVEGYIRASEVS 484
           +  R++LG KQ+E +P++ +      G+    TV + + KGA +EL  G+EG+     + 
Sbjct: 446 DNRRLALGHKQLEENPWDTFEGVFPVGSSHKCTVVSKNDKGAVLELPYGLEGFATIKNLE 505

Query: 485 RDRIEDASLILNVGDKVEAKFTGVDRKNRVINLS 518
           +   ED S +  VGD V+   T   + ++ I LS
Sbjct: 506 K---EDGSQV-EVGDAVDFVVTEFSKDDKRIVLS 535



 Score =  122 bits (306), Expect = 4e-32
 Identities = 104/354 (29%), Positives = 174/354 (49%), Gaps = 29/354 (8%)

Query: 183 DELLETLQEGTEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241
           DE L  + E   +KG V  + D    +++G   DGL+  T+            + +GDE+
Sbjct: 34  DETLTEISEKEVIKGTVVGINDKDVIINIGFKSDGLVPRTEF------RDLPDLKIGDEV 87

Query: 242 LVKVLKFDRDRTRVSLGLKQLGE-DPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGV 300
            + + + +    ++ L  K+      W  I       + + G V   T  G  V+I  GV
Sbjct: 88  ELFIEEQENALGQLVLSRKKAKMVRAWQDIEDALEYDNVIEGLVKRRTKGGLIVDIY-GV 146

Query: 301 EGLVHVSEMDWTNKNIHPSKV--VNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQS-- 356
           E  +  S++D     + P +   V VG ++EV V+ I+     + +  K       +   
Sbjct: 147 EAFLPGSQID-----VKPIRDFDVYVGKKMEVKVVKINHANDNVVVSHKVLIEKDLEKQK 201

Query: 357 --FAEAQAKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISW---NVPGEEAVREFKK 411
                   KG  + G IK++T+FG+FI L GG+DGL+H++DISW   N P E        
Sbjct: 202 AEILNNLEKGQVLEGVIKNMTNFGVFIDL-GGVDGLLHITDISWGRINHPEEV----LNL 256

Query: 412 GDEISAVVLAVDAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELE 471
            D++  VVL  D +++RISLG+KQ+   P+++  ++ + G+ V G +  V   GA +EL 
Sbjct: 257 DDKVQVVVLDFDDDKKRISLGMKQLTAHPWDSLSAELEVGSKVKGKIVNVADYGAFLELA 316

Query: 472 DGVEGYIRASEVS-RDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDE 524
            GVEG I  SE+S    + + +  + VGD++EA    +D++ R ++L IK   E
Sbjct: 317 PGVEGLIHVSEMSWSQHLRNPADFVKVGDEIEAVVLTLDKEERKMSLGIKQLTE 370