Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., 30S ribosomal protein S1 from Alteromonas macleodii MIT1002

 Score =  876 bits (2263), Expect = 0.0
 Identities = 428/556 (76%), Positives = 497/556 (89%)

Query: 1   MTESFAQLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGEL 60
           MTE+FAQLFEE L E + + G+IVKGTVV+I+   VLVDAGLKSESAIPA+QFKNA GEL
Sbjct: 1   MTENFAQLFEESLQELETRPGSIVKGTVVSIDKDIVLVDAGLKSESAIPADQFKNAEGEL 60

Query: 61  EVQVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGF 120
           E+ +G QVDVALDAVEDGFGET LSREKAKRHEAW+ LEKAYE+ AT+ G+INGKVKGGF
Sbjct: 61  EIAIGDQVDVALDAVEDGFGETILSREKAKRHEAWVELEKAYEDKATIKGVINGKVKGGF 120

Query: 121 TVELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSV 180
           TVE+N +RAFLPGSLVDVRP+RDT HLE KELEFKVIKLD KRNNVVVSRRAVIE+ESS 
Sbjct: 121 TVEVNSVRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDAKRNNVVVSRRAVIEAESSA 180

Query: 181 ERDELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240
           ER+ LL  L+EG E+KGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
Sbjct: 181 ERETLLANLEEGHEIKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240

Query: 241 ILVKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGV 300
           I VKVLKFD+++ RVSLG+KQ+G DPW  IA RYPEG K++G+VTNLTDYGCFVEIE+GV
Sbjct: 241 INVKVLKFDKEKQRVSLGMKQMGNDPWQEIASRYPEGTKINGQVTNLTDYGCFVEIEDGV 300

Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFAEA 360
           EGLVHVSEMDWTNKNIHPSKVVN+GD V+VMVL+IDEERRRISLGLKQC ANPW++FAE+
Sbjct: 301 EGLVHVSEMDWTNKNIHPSKVVNLGDTVDVMVLEIDEERRRISLGLKQCIANPWETFAES 360

Query: 361 QAKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVL 420
             KGDKV+GKIKSITDFGIFIGL+GGIDGLVHLSDISWN  GE+AVR++KKGDEISAVVL
Sbjct: 361 HEKGDKVSGKIKSITDFGIFIGLDGGIDGLVHLSDISWNKSGEDAVRDYKKGDEISAVVL 420

Query: 421 AVDAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELEDGVEGYIRA 480
            VD ERERISLG+KQ+E DPFN Y++DNKKGA+V GTVTAVDAKG T+ L + V+GYIR 
Sbjct: 421 QVDPERERISLGVKQIEEDPFNKYLTDNKKGAIVTGTVTAVDAKGVTVNLAEEVDGYIRV 480

Query: 481 SEVSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATLNKQDEA 540
           ++++ +R+EDA+ + +VGD +EAKF GVDRKNR +NLS+KAKD+A+E+E +  +N+Q++ 
Sbjct: 481 ADLAVERVEDATEVASVGDSIEAKFMGVDRKNRTVNLSVKAKDQADEKEAIDKVNQQEDV 540

Query: 541 AFGNAMADAFKAAKGE 556
            F NAMA+AFKAAKGE
Sbjct: 541 GFANAMAEAFKAAKGE 556