Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., 30S ribosomal protein S1 from Agrobacterium fabrum C58

 Score =  541 bits (1394), Expect = e-158
 Identities = 263/554 (47%), Positives = 380/554 (68%), Gaps = 5/554 (0%)

Query: 3   ESFAQLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGELEV 62
           + FA L EE        +G + KG V AIE    +VD GLK E  +P ++F   + +  +
Sbjct: 9   DDFAALLEESFASNDLAEGYVAKGIVTAIEKDVAIVDVGLKVEGRVPLKEFGAKSKDGTL 68

Query: 63  QVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGFTV 122
           +VG +V+V ++ +E+  GE  LSREKA+R E+W+ LE  +E    V G+I  +VKGGFTV
Sbjct: 69  KVGDEVEVYVERIENALGEAVLSREKARREESWVKLEAKFEAGERVEGVIFNQVKGGFTV 128

Query: 123 ELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSVER 182
           +L+G  AFLP S VD+RPIRD   L +    F+++K+D++R N+VVSRR V+E   + +R
Sbjct: 129 DLDGAVAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDKRRGNIVVSRRTVLEESRAEQR 188

Query: 183 DELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIL 242
            E+++ L+EG  V G+VKN+TDYGAFVDLGG+DGLLH+TDMAW+RV HPSEI+N+G ++ 
Sbjct: 189 SEIVQNLEEGQVVDGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEILNIGQQVK 248

Query: 243 VKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGVEG 302
           V++++ +++  R+SLG+KQL  DPW  I+ +YP G K+SG VTN+TDYG FVE+E G+EG
Sbjct: 249 VQIIRINQETHRISLGMKQLESDPWDGISAKYPVGKKISGTVTNITDYGAFVELEPGIEG 308

Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFAEAQA 362
           L+H+SEM WT KN+HP K+++   EV+V+VL++D  +RRISLGLKQ   NPWQ+FA +  
Sbjct: 309 LIHISEMSWTKKNVHPGKILSTSQEVDVVVLEVDPSKRRISLGLKQTLENPWQAFAFSHP 368

Query: 363 KGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVLAV 422
            G +V G++K+ T+FG+FIGLEG +DG+VHLSD+ WN PGE+ + EF KGD + AVVL V
Sbjct: 369 AGTEVEGEVKNKTEFGLFIGLEGDVDGMVHLSDLDWNRPGEQVIEEFNKGDVVKAVVLDV 428

Query: 423 DAERERISLGIKQMENDPFN--AYVSDNKKGALVNGTVTAVDAKGATIEL--EDGVEGYI 478
           D E+ERISLGIKQ+  D     A   D +K A+V+  V AV+  G  ++L   + +  +I
Sbjct: 429 DVEKERISLGIKQLGKDAVGEAATSGDLRKNAVVSCEVIAVNDGGVEVKLVNHEDITSFI 488

Query: 479 RASEVSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATLNKQD 538
           R ++++RDR +       VG   +A+     +K+R + LSIKA + AEE+E +A     D
Sbjct: 489 RRNDLARDRDDQRPERFAVGQVFDARVVNFSKKDRKVMLSIKALEIAEEKEAVAQFGSSD 548

Query: 539 E-AAFGNAMADAFK 551
             A+ G+ +  A K
Sbjct: 549 SGASLGDILGAALK 562