Pairwise Alignments

Query, 389 a.a., lipopolysaccharide assembly protein LapB from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., lipopolysaccharide assembly protein LapB from Dickeya dianthicola ME23

 Score =  457 bits (1177), Expect = e-133
 Identities = 213/389 (54%), Positives = 291/389 (74%)

Query: 1   MLEILFLLLPIAAAYGWYMGHRSAQQDKQKQSHQISRQYVTGLNLLLSDQSDKAVDHFIE 60
           MLE+LFLLLP+AAAYGWYMG RS QQDKQ +++++SR+YVTG+N LLS+Q DKAV+ F++
Sbjct: 1   MLELLFLLLPVAAAYGWYMGRRSVQQDKQDETNRLSREYVTGVNFLLSNQQDKAVELFLD 60

Query: 61  LLQVDNETIDTHLALGNLFRSRGEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVS 120
           +L+ D+ T + HL LGNLFRSRGEVDRAIRIHQ L   + L+ +Q+ LA+QQL +DYMV+
Sbjct: 61  MLKDDSNTFEAHLTLGNLFRSRGEVDRAIRIHQALTESASLSFEQRLLAVQQLGRDYMVA 120

Query: 121 GFLDRAEKIFEQLIDEPEHRESALQQLTAIYQQTREWHKAIECATALVKLGRKRMKVNIA 180
           G  DRAE+IF+QL+DE E R SALQQL  I+Q T +W  AI+ A  LVKLG+ +++  IA
Sbjct: 121 GLYDRAEEIFKQLVDEEEFRVSALQQLLQIHQSTSDWPNAIDTAEKLVKLGKTQLRSEIA 180

Query: 181 HFYCELAMLEKADSNDNKAIQLFKKALQEDPKCVRATISLGKLYLQNEDYQKTIDHLEMV 240
           HFYCE ++      + +KA+ + KKA   D +C R +I LG++Y+  ++Y + +  L+ V
Sbjct: 181 HFYCEQSLQAMGSDDLDKAMAMLKKASAADTQCARVSIMLGRIYMAQQNYAQAVAVLQQV 240

Query: 241 LEQDIDFIGEVLNTLAECYHHLGREQDLITFLRRCIANKAGVSAELMLAQLVAQHEGIAA 300
           LEQD + + E L  L ECY HL + +    FLRRC+  K+G + +LM+A ++ Q+E   +
Sbjct: 241 LEQDTELVSETLPMLQECYRHLQQPESWAAFLRRCVEEKSGSTTDLMMADVLEQYESTES 300

Query: 301 AQEILTRQLVKNPTMKGFYRLIDYHIAEAEEGRAKASLSTLQRLVGEQLKVKPHYRCRKC 360
           AQ  +TRQL ++PTM+ F+RLIDYH+ EAE+GRAK SL  L+ +VGEQ++ KP YRC KC
Sbjct: 301 AQTYITRQLQRHPTMRMFHRLIDYHLREAEDGRAKESLLVLRNMVGEQIQAKPRYRCHKC 360

Query: 361 GFSTHSLYWHCPSCKNWGSIKPIRGLDGE 389
           GF++ SLYWHCPSC+ W S+KPIRGLDGE
Sbjct: 361 GFTSQSLYWHCPSCRTWASVKPIRGLDGE 389