Pairwise Alignments

Query, 389 a.a., lipopolysaccharide assembly protein LapB from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., LPS regulatory protein; putative modulator of LpxC proteolysis from Escherichia coli BL21

 Score =  440 bits (1132), Expect = e-128
 Identities = 207/388 (53%), Positives = 280/388 (72%)

Query: 1   MLEILFLLLPIAAAYGWYMGHRSAQQDKQKQSHQISRQYVTGLNLLLSDQSDKAVDHFIE 60
           MLE+LFLLLP+AAAYGWYMG RSAQQ+KQ +++++SR YV G+N LLS+Q DKAVD F++
Sbjct: 1   MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVNFLLSNQQDKAVDLFLD 60

Query: 61  LLQVDNETIDTHLALGNLFRSRGEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVS 120
           +L+ D  T++ HL LGNLFRSRGEVDRAIRIHQ L+  + LT +Q+ LA+QQL +DYM +
Sbjct: 61  MLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLTYEQRLLAIQQLGRDYMAA 120

Query: 121 GFLDRAEKIFEQLIDEPEHRESALQQLTAIYQQTREWHKAIECATALVKLGRKRMKVNIA 180
           G  DRAE +F QL DE + R  ALQQL  IYQ T EW KAI+ A  LVKLG+ + +V IA
Sbjct: 121 GLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKAIDVAERLVKLGKDKQRVEIA 180

Query: 181 HFYCELAMLEKADSNDNKAIQLFKKALQEDPKCVRATISLGKLYLQNEDYQKTIDHLEMV 240
           HFYCELA+   A  + ++A+ L KK    D    R +I +G++++   +Y K ++ L+ V
Sbjct: 181 HFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMAKGEYAKAVESLQRV 240

Query: 241 LEQDIDFIGEVLNTLAECYHHLGREQDLITFLRRCIANKAGVSAELMLAQLVAQHEGIAA 300
           + QD + + E L  L  CY  LG+  +   FL+R +    G  AELMLA ++   +G  A
Sbjct: 241 ISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAVEENTGADAELMLADIIEARDGSEA 300

Query: 301 AQEILTRQLVKNPTMKGFYRLIDYHIAEAEEGRAKASLSTLQRLVGEQLKVKPHYRCRKC 360
           AQ  +TRQL ++PTM+ F++L+DYH+ EAEEGRAK SL  L+ +VGE+++ KP YRC+KC
Sbjct: 301 AQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRAKESLMVLRDMVGEKVRSKPRYRCQKC 360

Query: 361 GFSTHSLYWHCPSCKNWGSIKPIRGLDG 388
           GF+ ++LYWHCPSC+ W +IKPIRGLDG
Sbjct: 361 GFTAYTLYWHCPSCRAWSTIKPIRGLDG 388