Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., LysR substrate-binding domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  249 bits (636), Expect = 7e-71
 Identities = 132/306 (43%), Positives = 193/306 (63%), Gaps = 2/306 (0%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M L QL+Y+V + +  LN++  A  ++ +QPG+SK+++ LEDELG Q+F R GK L  VT
Sbjct: 1   MTLTQLRYLVAIADSGLNITLAAARVHATQPGLSKRLKQLEDELGFQLFVRKGKSLDAVT 60

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
            AG+H++  A  IL+   +I+A+AA   +   G L I+TTHTQAR+ALP  I   ++ YP
Sbjct: 61  HAGQHVLERARIILAETANIRAIAANLRNEARGELRIATTHTQARFALPAAIGALSRSYP 120

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPL-T 179
           +VS+H+  G   ++   +  G  + A+ + A       I LP Y W R IV P+ HPL T
Sbjct: 121 QVSVHLQPGRDGEVLAQLEAGRVDLAVISTAGAPPPAGIALPAYRWQRVIVAPQGHPLAT 180

Query: 180 KKEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIG 239
           +++  T+++LAA PLV+Y       S L  AF  V + P++V TA DAD+IKTYVR G+G
Sbjct: 181 RRQPPTLDELAALPLVSYDSSLKPDSSLRRAFEAVDLHPQIVMTAGDADLIKTYVRAGLG 240

Query: 240 VGVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPV 299
           +GV+A MA+    DTDL A+ A H+F   TT I  RR + LR Y+ +F+ +FAPHL R  
Sbjct: 241 IGVLAEMAM-LDSDTDLCALPADHLFPQCTTWIVLRRESVLREYVLEFIAQFAPHLDRRD 299

Query: 300 VEQAIS 305
           V +A++
Sbjct: 300 VVRALA 305