Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., Alkanesulfonate utilization operon LysR-family regulator Cbl from Variovorax sp. SCN45

 Score =  285 bits (729), Expect = 1e-81
 Identities = 138/304 (45%), Positives = 202/304 (66%), Gaps = 1/304 (0%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M  QQL+ + E V    N++  A+ L  SQ G+S+Q+R LE ELGI++F RSGK LT +T
Sbjct: 1   MNFQQLRSVRETVRSGFNLTEAAQTLRASQSGVSRQIRDLEQELGIELFVRSGKRLTGLT 60

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
           P G+H++ I   +L+    ++     +   + G L+++ TH+QARYALP  ++ F  R+P
Sbjct: 61  PPGDHLLPIIERVLAESRHLQQAGHIYLAQQQGVLSVAATHSQARYALPRAVQDFRLRFP 120

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
            V LH+HQG+P Q+++ +  G A+  IATEAL  +   + LPC  W  +++ P  HPL +
Sbjct: 121 GVRLHLHQGSPKQVAQMLQDGEADVGIATEALADHAQLLALPCRCWRHAVIAPVAHPLLQ 180

Query: 181 KE-QVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIG 239
           +E  +T+  LAA+PL+TY  G TGRS +D AF R G+ P+VV  A DADVIKTYV +G+G
Sbjct: 181 EEGPLTLAQLAAWPLITYDNGLTGRSRIDEAFAREGLAPEVVLAAMDADVIKTYVALGMG 240

Query: 240 VGVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPV 299
           VG++A +A D ++DT L A+DA H+F  + T +  RRG +LRSY++ F+E FAP L RPV
Sbjct: 241 VGIVADLACDPERDTHLGALDAGHLFGVNQTKLAVRRGGYLRSYVYAFIECFAPDLPRPV 300

Query: 300 VEQA 303
           +E A
Sbjct: 301 IELA 304