Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., Alkanesulfonate utilization operon LysR-family regulator Cbl from Variovorax sp. SCN45

 Score =  291 bits (746), Expect = 1e-83
 Identities = 138/304 (45%), Positives = 203/304 (66%), Gaps = 1/304 (0%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M  QQL+ + E V    N++  A  L+TSQPG+S+Q+R LE+ELGI++F R+GK LT +T
Sbjct: 1   MNFQQLRSVREAVRCGFNLTEVAHTLHTSQPGVSRQIRELEEELGIELFVRAGKRLTGLT 60

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
             G H++ I   +L    ++K    E    + G L+++ TH+QARYA+P  ++ F  ++P
Sbjct: 61  EPGGHVLPIIERMLMESSNLKHAGQEFVAQQSGLLSVAATHSQARYAMPVAVQEFRAQFP 120

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
            V LH+HQG+P Q+++ +  G A+  IATEAL  Y   + LPCY W  S++VP  HPL  
Sbjct: 121 NVKLHLHQGSPKQIAQMLLDGEADVGIATEALGDYPQLVALPCYRWTHSVIVPPGHPLL- 179

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 240
              +T++ L  YPL+TY  GFTGRS +D AF + G+ P +V  A DADVIKTYV++G+GV
Sbjct: 180 DAPLTLDALTRYPLITYDTGFTGRSRIDEAFEQRGLQPNIVLAAMDADVIKTYVQLGLGV 239

Query: 241 GVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
           G++A +A + ++DT L A+DA  +F  + T +  RRGT+LR Y++ F+E FAP LTR VV
Sbjct: 240 GIVAGVAYEAERDTQLRALDAGRLFGINLTKLAVRRGTYLRKYVYAFIESFAPTLTRAVV 299

Query: 301 EQAI 304
           E+A+
Sbjct: 300 EKAL 303