Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., Cys regulon transcriptional activator CysB from Variovorax sp. SCN45

 Score =  281 bits (718), Expect = 2e-80
 Identities = 129/305 (42%), Positives = 201/305 (65%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M L Q K++ E V  NLN++  A+ L+TSQPG+SK +  LE+ELG++IF R GK L +VT
Sbjct: 1   MNLHQFKFVQEAVRRNLNLTEAAKALHTSQPGVSKAIIELEEELGVEIFARHGKRLKRVT 60

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
             G+H++     I+  V ++K +  + +  + GTL+I+TTHTQARY LP  +    + YP
Sbjct: 61  EPGQHVIASIELIMREVGNLKRIGEQFSAQDSGTLSIATTHTQARYVLPVPVANLREAYP 120

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
           +V++ +HQG+P Q++  +    A   IATE+L  Y + + LPCY W   +V+PKDHPL  
Sbjct: 121 KVNVSLHQGSPDQVARMVIDEIAEIGIATESLDGYAELVTLPCYEWQHVLVLPKDHPLAA 180

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 240
           KE++++EDLA+ P++TY   FTGR+ +D AF +  +TP++   A D+DVIKTYVR+G+GV
Sbjct: 181 KERISLEDLASEPIITYHPSFTGRTRIDHAFAQKKLTPRIALEAIDSDVIKTYVRLGLGV 240

Query: 241 GVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
           G++A MAV  + + DLV     H+F  +   + F+R  +LR+++F F E  +  L R ++
Sbjct: 241 GIVAEMAVRDESNADLVVRPMGHVFGQNIARVAFKRSAYLRNFVFKFAELLSDRLDRNLI 300

Query: 301 EQAIS 305
            +A+S
Sbjct: 301 AKALS 305