Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., LysR substrate-binding domain-containing protein from Variovorax sp. OAS795

 Score =  106 bits (265), Expect = 6e-28
 Identities = 66/226 (29%), Positives = 117/226 (51%), Gaps = 13/226 (5%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M+L+ L+Y +  ++ +LN +  AE L+ +Q  +S Q++ LE+E+GI +F+R GK ++ +T
Sbjct: 1   MELRHLRYFI-ALSGSLNFTRAAERLHVTQSTLSHQIKQLEEEIGIALFDRVGKRVS-LT 58

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
            AG+  +   T+ L  ++       + +    G L + +THT     +P+ I  F  R+P
Sbjct: 59  EAGDEFLHYCTKALHEIDLGLGALRQESSEVAGELRVGSTHTFNLGFIPDCIASFHARHP 118

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAI-----MLPCYHWNRSIVVPKD 175
           RV + + + +  Q++  + +GT +  IA      Y+ A        P Y+    +VV K 
Sbjct: 119 RVKVVVEELSADQIAARLQQGTLDLGIA------YRPAAPGPLQFEPLYNEEMVLVVAKK 172

Query: 176 HPLTKKEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVV 221
           HPL ++++V + +L   P+V     F  R  LD  F   G  P VV
Sbjct: 173 HPLARRKRVRMVELHRLPMVLLPASFATRQMLDECFRSCGAQPHVV 218