Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  108 bits (269), Expect = 2e-28
 Identities = 72/248 (29%), Positives = 118/248 (47%), Gaps = 2/248 (0%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M  +QL     V  H  N+S  A+ L+ SQP +S Q++LL++  G  +++R+G+ + ++T
Sbjct: 1   MTPEQLITFATVAEHG-NISHAAQALHLSQPAVSGQLKLLQEAFGEPLYQRAGRGV-RLT 58

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
            AGE ++  A  +       +A+       E GT+ I  + T A Y LP +I  F  RYP
Sbjct: 59  AAGEQLLAHAERLRETFRQAQALREAMRGLERGTVRIGASTTPASYLLPYLIADFHGRYP 118

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
            V +    G   ++  A+               L     + P        +VP+ HPL  
Sbjct: 119 DVLVSTSHGNTAEIVAALDSVDIALIEGPPGQELPLGTQVTPWREDEIVAIVPRGHPLAG 178

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 240
            +Q T+  L AYPLV    G   R  ++ AF R G+  +V       + +K  VR G+GV
Sbjct: 179 SDQQTLAALGAYPLVLRESGSGVRQIVERAFARDGVAMRVALEIAGVEGVKEAVRAGMGV 238

Query: 241 GVIASMAV 248
           G +++M++
Sbjct: 239 GFVSAMSI 246