Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  102 bits (253), Expect = 1e-26
 Identities = 62/232 (26%), Positives = 114/232 (49%), Gaps = 1/232 (0%)

Query: 20  SATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVTPAGEHIVRIATEILSRVES 79
           S  AE L+ +QP ISK++  LE +L +++F+R G+ +T +T AG  ++  A +IL+ ++ 
Sbjct: 19  SGAAERLFLTQPAISKRIAGLEQQLDVRLFDRLGREVT-LTEAGRALLPRAYQILNVLDD 77

Query: 80  IKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYPRVSLHMHQGTPTQMSEAIA 139
            +      T    G L ++T+H    + LP +++ FT++YP V+L +      Q  + I 
Sbjct: 78  TRRALTNLTGAVSGRLTLATSHHIGLHRLPPLLRVFTRQYPAVALDIQFMDSEQAYDEIL 137

Query: 140 KGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTKKEQVTIEDLAAYPLVTYVF 199
            G A  A+ T A   +     +P +      V   +HPL   + V++ D+A +P V    
Sbjct: 138 HGRAEIAVITLAPEPHHLVKAVPVWDDALDFVAAPEHPLANNQSVSLADIARHPAVFPGG 197

Query: 200 GFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGVGVIASMAVDKK 251
                  +   F   G+TP +  +    + IK  V +G+   V+    +D++
Sbjct: 198 NTFTHHIVQRLFESQGLTPNIAMSTNYLETIKMMVSIGLAWSVLPRTMLDEQ 249