Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., Alkanesulfonate utilization operon LysR-family regulator CbI from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  295 bits (755), Expect = 1e-84
 Identities = 141/306 (46%), Positives = 206/306 (67%), Gaps = 1/306 (0%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M  QQL+ + E      N++  A  LYTSQPG+S+Q+R LE+ELG+ IF R+GK LT +T
Sbjct: 1   MNFQQLRSVREAARCGYNLTEVAAMLYTSQPGVSRQIRELEEELGVTIFARAGKRLTGLT 60

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
             G+ ++ I   +L   +++++   E      G L+I+ TH+QARYALP  ++ F   +P
Sbjct: 61  GPGQTLLPIVERLLQEADNLRSAGKEFVSRLEGGLSIAATHSQARYALPHAVRDFRALFP 120

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
           +V+L++HQG+P Q++E +  G A+  IATEAL  Y   + LPCY W  S+VVP  HPL +
Sbjct: 121 QVTLNLHQGSPKQVAEMLIAGEADIGIATEALANYPQLVTLPCYRWTHSVVVPHGHPLLR 180

Query: 181 KE-QVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIG 239
            E  +++  LA +P++TY  G+TGRS +D AF + G+ P VV TA DADVIKTYV +G+G
Sbjct: 181 VEGPLSLHQLAEHPIITYDLGYTGRSHIDDAFKKQGVQPNVVITAMDADVIKTYVELGMG 240

Query: 240 VGVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPV 299
           VG++AS+AVD  +D  L A+DA H+F  + T +  RRGT+LR Y + F+E FAP LTR +
Sbjct: 241 VGIVASIAVDPDRDRHLHALDARHLFEINVTRLAVRRGTWLRGYAYSFIENFAPSLTRQI 300

Query: 300 VEQAIS 305
           VE+A++
Sbjct: 301 VEEALN 306