Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., HTH-type transcriptional regulator Cbl from Erwinia tracheiphila SCR3

 Score =  241 bits (616), Expect = 1e-68
 Identities = 120/306 (39%), Positives = 189/306 (61%), Gaps = 1/306 (0%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M  QQLK I E    + N++  A  L+TSQ G+S+ +R LE+ELG++IF R GK L  +T
Sbjct: 1   MNFQQLKIIREAARCDFNLTDVANTLFTSQSGVSRHIRDLEEELGVEIFIRRGKRLLGMT 60

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
             G+ ++ IA  IL     I+ +A   T+   G L I+TTHTQARY+LPE+IK F   YP
Sbjct: 61  EPGKALLTIAERILDEAGKIRRLADVFTNESSGVLTIATTHTQARYSLPEIIKAFRTLYP 120

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
            V L ++Q +P +++  +  G A+  IA+E +         P ++W+ +++VP DHPL  
Sbjct: 121 SVRLVLNQCSPQEIASMLLSGEADIGIASEQVMSVPSLAAFPWFNWHHALLVPNDHPLES 180

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 240
           ++ V++  L+ YPLVTY  G TGRS +D AF   G+TP +V +A D+DV+KTYV + +GV
Sbjct: 181 EQPVSLAALSRYPLVTYRQGITGRSRVDRAFQAAGLTPDIVLSAQDSDVVKTYVSLELGV 240

Query: 241 GVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLT-RPV 299
           G++A  A    + + +  ++A H+F ++T  +G +RG   R+Y++ F+E    +L+   +
Sbjct: 241 GILADQACQPDEHSGMTRLEAKHLFESNTVWLGLKRGQLQRNYVWQFLELCNANLSLEEI 300

Query: 300 VEQAIS 305
             QA+S
Sbjct: 301 KRQALS 306